Gene : Glyma.10G294100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR13711:SF213 - PROTEIN HMG-20 Genomic Order:  2941
Name:  ? Glyma.10G294100 Secondary Identifier:  ? PAC:30477406
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G294100 0.5kb upstream 0.5kb upstream 5788 true Chr10: 51133947-51139734 Glycine max
Glyma.10G294100 0.5kb upstream 0.5kb upstream 500 false Chr10: 51139235-51139734 Glycine max
Glyma.10G294100 0.5kb downstream 0.5kb downstream 5788 true Chr10: 51133447-51139234 Glycine max
Glyma.10G294100 0.5kb downstream 0.5kb downstream 500 false Chr10: 51133447-51133946 Glycine max
Glyma.10G294100 1.0kb upstream 1.0kb upstream 6288 true Chr10: 51133947-51140234 Glycine max
Glyma.10G294100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51139235-51140234 Glycine max
Glyma.10G294100 1.0kb downstream 1.0kb downstream 6288 true Chr10: 51132947-51139234 Glycine max
Glyma.10G294100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51132947-51133946 Glycine max
Glyma.10G294100 2.0kb upstream 2.0kb upstream 7288 true Chr10: 51133947-51141234 Glycine max
Glyma.10G294100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51139235-51141234 Glycine max
Glyma.10G294100 2.0kb downstream 2.0kb downstream 7288 true Chr10: 51131947-51139234 Glycine max
Glyma.10G294100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51131947-51133946 Glycine max
Glyma.10G294100 5.0kb upstream 5.0kb upstream 10288 true Chr10: 51133947-51144234 Glycine max
Glyma.10G294100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51139235-51144234 Glycine max
Glyma.10G294100 5.0kb downstream 5.0kb downstream 10288 true Chr10: 51128947-51139234 Glycine max
Glyma.10G294100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51128947-51133946 Glycine max
Glyma.10G294100 10.0kb upstream 10.0kb upstream 15288 true Chr10: 51133947-51149234 Glycine max
Glyma.10G294100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51139235-51149234 Glycine max
Glyma.10G294100 10.0kb downstream 10.0kb downstream 15288 true Chr10: 51123947-51139234 Glycine max
Glyma.10G294100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51123947-51133946 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301082 5265 Fabidae View MSA
124071278 5270 Rosid View MSA
123745117 5271 Pentapetalae View MSA
122793766 5272 Eudicot View MSA
122048952 5273 Angiosperm View MSA
121343849 5274 Embryophyte View MSA
123424352 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.44359 0.0 28.8399   High
cufflinks 2.80661 0.0 18.8842    
cufflinks 1.31204 0.0 13.1888    
cufflinks 2.42143 0.0 13.6584    
cufflinks 0.172843 0.0 1.18517 Low Low
cufflinks 0.11951 0.0 0.852046 Low Low
cufflinks 9.64886 0.0 37.6257   High
cufflinks 0.376823 0.0 1.8016    
cufflinks 0.685082 0.0 3.98972    
cufflinks 0.023     Low  
cufflinks 0.005     Low Low
cufflinks 0.139        
cufflinks 0.008     Low  
cufflinks 0.006     Low  
cufflinks 0.104        
cufflinks 0.331        
cufflinks 0.002     Low Low
cufflinks 0.125        
cufflinks 0.297        
cufflinks 0.69       High
cufflinks 0.004     Low Low
cufflinks 0.548       High
cufflinks 0.294        
cufflinks 0.008     Low  
cufflinks 0.553       High
cufflinks 0.002     Low Low

0 Strain