Gene : Glyma.10G295100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12741:SF12 - CALLOSE SYNTHASE 9 Genomic Order:  2951
Name:  ? Glyma.10G295100 Secondary Identifier:  ? PAC:30477057
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G295100 0.5kb upstream 0.5kb upstream 44060 true Chr10: 51200595-51244654 Glycine max
Glyma.10G295100 0.5kb upstream 0.5kb upstream 500 false Chr10: 51200595-51201094 Glycine max
Glyma.10G295100 0.5kb downstream 0.5kb downstream 44060 true Chr10: 51201095-51245154 Glycine max
Glyma.10G295100 0.5kb downstream 0.5kb downstream 500 false Chr10: 51244655-51245154 Glycine max
Glyma.10G295100 1.0kb upstream 1.0kb upstream 44560 true Chr10: 51200095-51244654 Glycine max
Glyma.10G295100 1.0kb upstream 1.0kb upstream 1000 false Chr10: 51200095-51201094 Glycine max
Glyma.10G295100 1.0kb downstream 1.0kb downstream 44560 true Chr10: 51201095-51245654 Glycine max
Glyma.10G295100 1.0kb downstream 1.0kb downstream 1000 false Chr10: 51244655-51245654 Glycine max
Glyma.10G295100 2.0kb upstream 2.0kb upstream 45560 true Chr10: 51199095-51244654 Glycine max
Glyma.10G295100 2.0kb upstream 2.0kb upstream 2000 false Chr10: 51199095-51201094 Glycine max
Glyma.10G295100 2.0kb downstream 2.0kb downstream 45560 true Chr10: 51201095-51246654 Glycine max
Glyma.10G295100 2.0kb downstream 2.0kb downstream 2000 false Chr10: 51244655-51246654 Glycine max
Glyma.10G295100 5.0kb upstream 5.0kb upstream 48560 true Chr10: 51196095-51244654 Glycine max
Glyma.10G295100 5.0kb upstream 5.0kb upstream 5000 false Chr10: 51196095-51201094 Glycine max
Glyma.10G295100 5.0kb downstream 5.0kb downstream 48560 true Chr10: 51201095-51249654 Glycine max
Glyma.10G295100 5.0kb downstream 5.0kb downstream 5000 false Chr10: 51244655-51249654 Glycine max
Glyma.10G295100 10.0kb upstream 10.0kb upstream 53560 true Chr10: 51191095-51244654 Glycine max
Glyma.10G295100 10.0kb upstream 10.0kb upstream 10000 false Chr10: 51191095-51201094 Glycine max
Glyma.10G295100 10.0kb downstream 10.0kb downstream 53560 true Chr10: 51201095-51254654 Glycine max
Glyma.10G295100 10.0kb downstream 10.0kb downstream 10000 false Chr10: 51244655-51254654 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303104 5265 Fabidae View MSA
124064291 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.80543 0.0 44.6768    
cufflinks 15.571 0.0 73.6241    
cufflinks 9.63044 0.0 35.3664    
cufflinks 16.8217 0.0 70.2211    
cufflinks 11.069 0.0 41.1685    
cufflinks 4.85692 0.0 14.3993   Low
cufflinks 24.1006 0.0 97.2192 High High
cufflinks 11.0422 0.0 41.2213    
cufflinks 12.2028 0.0 46.5977    
cufflinks 0.778        
cufflinks 0.395       Low
cufflinks 0.848        
cufflinks 0.659        
cufflinks 0.74        
cufflinks 0.532        
cufflinks 0.765        
cufflinks 0.651        
cufflinks 1.246       High
cufflinks 1.194       High
cufflinks 0.768        
cufflinks 0.504       Low
cufflinks 0.842        
cufflinks 0.769        
cufflinks 0.467       Low
cufflinks 0.78        
cufflinks 0.522        

0 Strain