Gene : Glyma.10G288900 G. max Wm82.a2.v1
Defline:  (1 of 21) PF01585 - G-patch domain (G-patch) Genomic Order:  2889
Name:  ? Glyma.10G288900 Secondary Identifier:  ? PAC:30476953
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G288900 0.5kb upstream 0.5kb upstream 2984 true Chr10: 50760926-50763909 Glycine max
Glyma.10G288900 0.5kb upstream 0.5kb upstream 500 false Chr10: 50760926-50761425 Glycine max
Glyma.10G288900 0.5kb downstream 0.5kb downstream 2984 true Chr10: 50761426-50764409 Glycine max
Glyma.10G288900 0.5kb downstream 0.5kb downstream 500 false Chr10: 50763910-50764409 Glycine max
Glyma.10G288900 1.0kb upstream 1.0kb upstream 3484 true Chr10: 50760426-50763909 Glycine max
Glyma.10G288900 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50760426-50761425 Glycine max
Glyma.10G288900 1.0kb downstream 1.0kb downstream 3484 true Chr10: 50761426-50764909 Glycine max
Glyma.10G288900 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50763910-50764909 Glycine max
Glyma.10G288900 2.0kb upstream 2.0kb upstream 4484 true Chr10: 50759426-50763909 Glycine max
Glyma.10G288900 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50759426-50761425 Glycine max
Glyma.10G288900 2.0kb downstream 2.0kb downstream 4484 true Chr10: 50761426-50765909 Glycine max
Glyma.10G288900 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50763910-50765909 Glycine max
Glyma.10G288900 5.0kb upstream 5.0kb upstream 7484 true Chr10: 50756426-50763909 Glycine max
Glyma.10G288900 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50756426-50761425 Glycine max
Glyma.10G288900 5.0kb downstream 5.0kb downstream 7484 true Chr10: 50761426-50768909 Glycine max
Glyma.10G288900 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50763910-50768909 Glycine max
Glyma.10G288900 10.0kb upstream 10.0kb upstream 12484 true Chr10: 50751426-50763909 Glycine max
Glyma.10G288900 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50751426-50761425 Glycine max
Glyma.10G288900 10.0kb downstream 10.0kb downstream 12484 true Chr10: 50761426-50773909 Glycine max
Glyma.10G288900 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50763910-50773909 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296239 5265 Fabidae View MSA
124065567 5270 Rosid View MSA
123743393 5271 Pentapetalae View MSA
122790143 5272 Eudicot View MSA
122044236 5273 Angiosperm View MSA
121347132 5274 Embryophyte View MSA
123425168 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1654 0.0 44.4481   High
cufflinks 8.91708 0.0 26.1172   Low
cufflinks 10.0698 0.0 28.9173    
cufflinks 12.2358 0.0 34.3799    
cufflinks 9.74717 0.0 28.2447    
cufflinks 20.4591 0.0 55.3957   High
cufflinks 9.76811 0.0 28.2995    
cufflinks 14.7724 0.0 40.8613    
cufflinks 10.7256 0.0 30.7254    
cufflinks 3.296        
cufflinks 6.882     High High
cufflinks 4.065        
cufflinks 4.174        
cufflinks 4.504        
cufflinks 4.387        
cufflinks 3.629        
cufflinks 3.591        
cufflinks 3.453        
cufflinks 2.137       Low
cufflinks 3.887        
cufflinks 5.699        
cufflinks 3.666        
cufflinks 3.122        
cufflinks 8.297     High High
cufflinks 3.781        
cufflinks 6.033       High

0 Strain