Gene : Glyma.10G289600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11946:SF89 - METHIONYL-TRNA SYNTHETASE Genomic Order:  2896
Name:  ? Glyma.10G289600 Secondary Identifier:  ? PAC:30477835
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax TRNA-CHARGING-PWY Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G289600 0.5kb upstream 0.5kb upstream 6823 true Chr10: 50785592-50792414 Glycine max
Glyma.10G289600 0.5kb upstream 0.5kb upstream 500 false Chr10: 50791915-50792414 Glycine max
Glyma.10G289600 0.5kb downstream 0.5kb downstream 6823 true Chr10: 50785092-50791914 Glycine max
Glyma.10G289600 0.5kb downstream 0.5kb downstream 500 false Chr10: 50785092-50785591 Glycine max
Glyma.10G289600 1.0kb upstream 1.0kb upstream 7323 true Chr10: 50785592-50792914 Glycine max
Glyma.10G289600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50791915-50792914 Glycine max
Glyma.10G289600 1.0kb downstream 1.0kb downstream 7323 true Chr10: 50784592-50791914 Glycine max
Glyma.10G289600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50784592-50785591 Glycine max
Glyma.10G289600 2.0kb upstream 2.0kb upstream 8323 true Chr10: 50785592-50793914 Glycine max
Glyma.10G289600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50791915-50793914 Glycine max
Glyma.10G289600 2.0kb downstream 2.0kb downstream 8323 true Chr10: 50783592-50791914 Glycine max
Glyma.10G289600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50783592-50785591 Glycine max
Glyma.10G289600 5.0kb upstream 5.0kb upstream 11323 true Chr10: 50785592-50796914 Glycine max
Glyma.10G289600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50791915-50796914 Glycine max
Glyma.10G289600 5.0kb downstream 5.0kb downstream 11323 true Chr10: 50780592-50791914 Glycine max
Glyma.10G289600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50780592-50785591 Glycine max
Glyma.10G289600 10.0kb upstream 10.0kb upstream 16323 true Chr10: 50785592-50801914 Glycine max
Glyma.10G289600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50791915-50801914 Glycine max
Glyma.10G289600 10.0kb downstream 10.0kb downstream 16323 true Chr10: 50775592-50791914 Glycine max
Glyma.10G289600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50775592-50785591 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303367 5265 Fabidae View MSA
124065458 5270 Rosid View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.38683 0.0 27.0598   High
cufflinks 7.50863 0.0 23.4911   High
cufflinks 2.25556 0.0 9.82342   Low
cufflinks 4.26323 0.0 14.9646    
cufflinks 4.61955 0.0 15.8695    
cufflinks 2.42684 0.0 7.64273   Low
cufflinks 7.0164 0.0 26.0368   High
cufflinks 3.75016 0.0 16.1995    
cufflinks 2.61642 0.0 8.16499    
cufflinks 1.313        
cufflinks 0.118       Low
cufflinks 0.794        
cufflinks 0.957        
cufflinks 1.157        
cufflinks 0.45        
cufflinks 3.727       High
cufflinks 0.297        
cufflinks 0.934        
cufflinks 1.931        
cufflinks 3.715       High
cufflinks 0.188       Low
cufflinks 3.22       High
cufflinks 3.57       High
cufflinks 0.196       Low
cufflinks 3.774       High
cufflinks 0.23       Low

0 Strain