Gene : Glyma.10G280500 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR23084:SF119 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 Genomic Order:  2805
Name:  ? Glyma.10G280500 Secondary Identifier:  ? PAC:30477558
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G280500 0.5kb upstream 0.5kb upstream 10523 true Chr10: 50162526-50173048 Glycine max
Glyma.10G280500 0.5kb upstream 0.5kb upstream 500 false Chr10: 50162526-50163025 Glycine max
Glyma.10G280500 0.5kb downstream 0.5kb downstream 10523 true Chr10: 50163026-50173548 Glycine max
Glyma.10G280500 0.5kb downstream 0.5kb downstream 500 false Chr10: 50173049-50173548 Glycine max
Glyma.10G280500 1.0kb upstream 1.0kb upstream 11023 true Chr10: 50162026-50173048 Glycine max
Glyma.10G280500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50162026-50163025 Glycine max
Glyma.10G280500 1.0kb downstream 1.0kb downstream 11023 true Chr10: 50163026-50174048 Glycine max
Glyma.10G280500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50173049-50174048 Glycine max
Glyma.10G280500 2.0kb upstream 2.0kb upstream 12023 true Chr10: 50161026-50173048 Glycine max
Glyma.10G280500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50161026-50163025 Glycine max
Glyma.10G280500 2.0kb downstream 2.0kb downstream 12023 true Chr10: 50163026-50175048 Glycine max
Glyma.10G280500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50173049-50175048 Glycine max
Glyma.10G280500 5.0kb upstream 5.0kb upstream 15023 true Chr10: 50158026-50173048 Glycine max
Glyma.10G280500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50158026-50163025 Glycine max
Glyma.10G280500 5.0kb downstream 5.0kb downstream 15023 true Chr10: 50163026-50178048 Glycine max
Glyma.10G280500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50173049-50178048 Glycine max
Glyma.10G280500 10.0kb upstream 10.0kb upstream 20023 true Chr10: 50153026-50173048 Glycine max
Glyma.10G280500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50153026-50163025 Glycine max
Glyma.10G280500 10.0kb downstream 10.0kb downstream 20023 true Chr10: 50163026-50183048 Glycine max
Glyma.10G280500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50173049-50183048 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303924 5265 Fabidae View MSA
124066570 5270 Rosid View MSA
123740102 5271 Pentapetalae View MSA
122787208 5272 Eudicot View MSA
122045531 5273 Angiosperm View MSA
121346964 5274 Embryophyte View MSA
123427675 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.86607 0.0 15.9865   High
cufflinks 5.51465 0.0 15.0958   High
cufflinks 4.53551 0.0 12.5867    
cufflinks 4.34337 0.0 12.1159    
cufflinks 3.64506 0.0 10.3797    
cufflinks 3.24062 0.0 9.342   Low
cufflinks 4.04029 0.0 11.3843    
cufflinks 3.73682 0.0 10.6033    
cufflinks 3.45907 0.0 9.90125    
cufflinks 1.039        
cufflinks 0.892       Low
cufflinks 1.952        
cufflinks 1.237        
cufflinks 1.375        
cufflinks 1.555        
cufflinks 2.711       High
cufflinks 0.816       Low
cufflinks 1.887        
cufflinks 2.311        
cufflinks 3.714       High
cufflinks 1.009        
cufflinks 3.056       High
cufflinks 2.406        
cufflinks 0.872       Low
cufflinks 3.094       High
cufflinks 1.166        

0 Strain