Gene : Glyma.10G281600 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR21704 - NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED Genomic Order:  2816
Name:  ? Glyma.10G281600 Secondary Identifier:  ? PAC:30476293
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G281600 0.5kb upstream 0.5kb upstream 5034 true Chr10: 50265922-50270955 Glycine max
Glyma.10G281600 0.5kb upstream 0.5kb upstream 500 false Chr10: 50270456-50270955 Glycine max
Glyma.10G281600 0.5kb downstream 0.5kb downstream 5034 true Chr10: 50265422-50270455 Glycine max
Glyma.10G281600 0.5kb downstream 0.5kb downstream 500 false Chr10: 50265422-50265921 Glycine max
Glyma.10G281600 1.0kb upstream 1.0kb upstream 5534 true Chr10: 50265922-50271455 Glycine max
Glyma.10G281600 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50270456-50271455 Glycine max
Glyma.10G281600 1.0kb downstream 1.0kb downstream 5534 true Chr10: 50264922-50270455 Glycine max
Glyma.10G281600 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50264922-50265921 Glycine max
Glyma.10G281600 2.0kb upstream 2.0kb upstream 6534 true Chr10: 50265922-50272455 Glycine max
Glyma.10G281600 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50270456-50272455 Glycine max
Glyma.10G281600 2.0kb downstream 2.0kb downstream 6534 true Chr10: 50263922-50270455 Glycine max
Glyma.10G281600 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50263922-50265921 Glycine max
Glyma.10G281600 5.0kb upstream 5.0kb upstream 9534 true Chr10: 50265922-50275455 Glycine max
Glyma.10G281600 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50270456-50275455 Glycine max
Glyma.10G281600 5.0kb downstream 5.0kb downstream 9534 true Chr10: 50260922-50270455 Glycine max
Glyma.10G281600 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50260922-50265921 Glycine max
Glyma.10G281600 10.0kb upstream 10.0kb upstream 14534 true Chr10: 50265922-50280455 Glycine max
Glyma.10G281600 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50270456-50280455 Glycine max
Glyma.10G281600 10.0kb downstream 10.0kb downstream 14534 true Chr10: 50255922-50270455 Glycine max
Glyma.10G281600 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50255922-50265921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313220 5265 Fabidae View MSA
124050567 5270 Rosid View MSA
123751665 5271 Pentapetalae View MSA
122793321 5272 Eudicot View MSA
122042349 5273 Angiosperm View MSA
121309949 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.2178 0.0 80.7388   High
cufflinks 5.49304 0.0 24.1649    
cufflinks 20.2205 0.0 84.9804 High High
cufflinks 7.47436 0.0 33.9234    
cufflinks 10.1279 0.0 39.8358    
cufflinks 18.9279 0.0 72.163   High
cufflinks 3.72999 0.0 14.4466   Low
cufflinks 3.66381 0.0 16.133   Low
cufflinks 9.0204 0.0 38.9366    
cufflinks 0.537       Low
cufflinks 4.751       High
cufflinks 1.656        
cufflinks 1.964        
cufflinks 0.839        
cufflinks 2.879        
cufflinks 1.002        
cufflinks 6.585     High High
cufflinks 0.804        
cufflinks 0.938        
cufflinks 0.914        
cufflinks 3.552        
cufflinks 1.182        
cufflinks 1.36        
cufflinks 4.859       High
cufflinks 0.894        
cufflinks 7.294     High High

0 Strain