Gene : Glyma.10G284500 G. max Wm82.a2.v1
Defline:  (1 of 6) PF02373//PF10497 - JmjC domain, hydroxylase (JmjC) // Zinc-finger domain of monoamine-oxidase A repressor R1 (zf-4CXXC_R1) Genomic Order:  2845
Name:  ? Glyma.10G284500 Secondary Identifier:  ? PAC:30475640
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.10G284500 0.5kb upstream 0.5kb upstream 10251 true Chr10: 50500478-50510728 Glycine max
Glyma.10G284500 0.5kb upstream 0.5kb upstream 500 false Chr10: 50500478-50500977 Glycine max
Glyma.10G284500 0.5kb downstream 0.5kb downstream 10251 true Chr10: 50500978-50511228 Glycine max
Glyma.10G284500 0.5kb downstream 0.5kb downstream 500 false Chr10: 50510729-50511228 Glycine max
Glyma.10G284500 1.0kb upstream 1.0kb upstream 10751 true Chr10: 50499978-50510728 Glycine max
Glyma.10G284500 1.0kb upstream 1.0kb upstream 1000 false Chr10: 50499978-50500977 Glycine max
Glyma.10G284500 1.0kb downstream 1.0kb downstream 10751 true Chr10: 50500978-50511728 Glycine max
Glyma.10G284500 1.0kb downstream 1.0kb downstream 1000 false Chr10: 50510729-50511728 Glycine max
Glyma.10G284500 2.0kb upstream 2.0kb upstream 11751 true Chr10: 50498978-50510728 Glycine max
Glyma.10G284500 2.0kb upstream 2.0kb upstream 2000 false Chr10: 50498978-50500977 Glycine max
Glyma.10G284500 2.0kb downstream 2.0kb downstream 11751 true Chr10: 50500978-50512728 Glycine max
Glyma.10G284500 2.0kb downstream 2.0kb downstream 2000 false Chr10: 50510729-50512728 Glycine max
Glyma.10G284500 5.0kb upstream 5.0kb upstream 14751 true Chr10: 50495978-50510728 Glycine max
Glyma.10G284500 5.0kb upstream 5.0kb upstream 5000 false Chr10: 50495978-50500977 Glycine max
Glyma.10G284500 5.0kb downstream 5.0kb downstream 14751 true Chr10: 50500978-50515728 Glycine max
Glyma.10G284500 5.0kb downstream 5.0kb downstream 5000 false Chr10: 50510729-50515728 Glycine max
Glyma.10G284500 10.0kb upstream 10.0kb upstream 19751 true Chr10: 50490978-50510728 Glycine max
Glyma.10G284500 10.0kb upstream 10.0kb upstream 10000 false Chr10: 50490978-50500977 Glycine max
Glyma.10G284500 10.0kb downstream 10.0kb downstream 19751 true Chr10: 50500978-50520728 Glycine max
Glyma.10G284500 10.0kb downstream 10.0kb downstream 10000 false Chr10: 50510729-50520728 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314720 5265 Fabidae View MSA
124073545 5270 Rosid View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.48388 0.0 6.85672    
cufflinks 4.29143 0.0 11.4965   High
cufflinks 1.55164 0.0 4.47895    
cufflinks 1.15026 0.0 3.46486    
cufflinks 2.74421 0.0 7.53128    
cufflinks 0.689346 0.0 2.24295   Low
cufflinks 1.65553 0.0 4.77893    
cufflinks 1.26166 0.0 3.75971    
cufflinks 5.54599 0.0 14.7969   High
cufflinks 2.131        
cufflinks 16.742     High High
cufflinks 1.611        
cufflinks 1.317        
cufflinks 1.899        
cufflinks 59.949     High High
cufflinks 2.248        
cufflinks 1.481        
cufflinks 0.944       Low
cufflinks 4.383        
cufflinks 1.702        
cufflinks 22.636     High High
cufflinks 1.806        
cufflinks 2.699        
cufflinks 9.123     High  
cufflinks 1.863        
cufflinks 12.015     High  

0 Strain