Gene : Glyma.11G031800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR10969//PTHR10969:SF40 - MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED Genomic Order:  318
Name:  ? Glyma.11G031800 Secondary Identifier:  ? PAC:30529719
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G031800 0.5kb upstream 0.5kb upstream 4043 true Chr11: 2330822-2334864 Glycine max
Glyma.11G031800 0.5kb upstream 0.5kb upstream 500 false Chr11: 2334365-2334864 Glycine max
Glyma.11G031800 0.5kb downstream 0.5kb downstream 4043 true Chr11: 2330322-2334364 Glycine max
Glyma.11G031800 0.5kb downstream 0.5kb downstream 500 false Chr11: 2330322-2330821 Glycine max
Glyma.11G031800 1.0kb upstream 1.0kb upstream 4543 true Chr11: 2330822-2335364 Glycine max
Glyma.11G031800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2334365-2335364 Glycine max
Glyma.11G031800 1.0kb downstream 1.0kb downstream 4543 true Chr11: 2329822-2334364 Glycine max
Glyma.11G031800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2329822-2330821 Glycine max
Glyma.11G031800 2.0kb upstream 2.0kb upstream 5543 true Chr11: 2330822-2336364 Glycine max
Glyma.11G031800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2334365-2336364 Glycine max
Glyma.11G031800 2.0kb downstream 2.0kb downstream 5543 true Chr11: 2328822-2334364 Glycine max
Glyma.11G031800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2328822-2330821 Glycine max
Glyma.11G031800 5.0kb upstream 5.0kb upstream 8543 true Chr11: 2330822-2339364 Glycine max
Glyma.11G031800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2334365-2339364 Glycine max
Glyma.11G031800 5.0kb downstream 5.0kb downstream 8543 true Chr11: 2325822-2334364 Glycine max
Glyma.11G031800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2325822-2330821 Glycine max
Glyma.11G031800 10.0kb upstream 10.0kb upstream 13543 true Chr11: 2330822-2344364 Glycine max
Glyma.11G031800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2334365-2344364 Glycine max
Glyma.11G031800 10.0kb downstream 10.0kb downstream 13543 true Chr11: 2320822-2334364 Glycine max
Glyma.11G031800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2320822-2330821 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246823 5265 Fabidae Singleton cluster - no MSA
124068042 5270 Rosid View MSA
123752408 5271 Pentapetalae View MSA
122791477 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 40.2726 0.0 178.196 High  
cufflinks 21.3726 0.0 95.708 High Low
cufflinks 136.457 0.0 718.296 High High
cufflinks 29.5541 0.0 124.014 High  
cufflinks 34.6046 0.0 144.46 High  
cufflinks 95.2555 0.0 449.907 High High
cufflinks 28.7317 0.0 120.026 High  
cufflinks 44.737 0.0 201.604 High  
cufflinks 47.7628 0.0 218.711 High  
cufflinks 0.787       Low
cufflinks 8.556     High High
cufflinks 3.706        
cufflinks 1.238        
cufflinks 0.904        
cufflinks 6.996     High High
cufflinks 1.073        
cufflinks 1.593        
cufflinks 1.493        
cufflinks 1.051        
cufflinks 1.585        
cufflinks 6.155     High High
cufflinks 1.459        
cufflinks 0.723       Low
cufflinks 7.902     High High
cufflinks 1.639        
cufflinks 4.087        

0 Strain