Gene : Glyma.11G020600 G. max Wm82.a2.v1
Defline:  (1 of 105) PF03168 - Late embryogenesis abundant protein (LEA_2) Genomic Order:  206
Name:  ? Glyma.11G020600 Secondary Identifier:  ? PAC:30529602
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G020600 0.5kb upstream 0.5kb upstream 1034 true Chr11: 1453020-1454053 Glycine max
Glyma.11G020600 0.5kb upstream 0.5kb upstream 500 false Chr11: 1453554-1454053 Glycine max
Glyma.11G020600 0.5kb downstream 0.5kb downstream 1034 true Chr11: 1452520-1453553 Glycine max
Glyma.11G020600 0.5kb downstream 0.5kb downstream 500 false Chr11: 1452520-1453019 Glycine max
Glyma.11G020600 1.0kb upstream 1.0kb upstream 1534 true Chr11: 1453020-1454553 Glycine max
Glyma.11G020600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1453554-1454553 Glycine max
Glyma.11G020600 1.0kb downstream 1.0kb downstream 1534 true Chr11: 1452020-1453553 Glycine max
Glyma.11G020600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1452020-1453019 Glycine max
Glyma.11G020600 2.0kb upstream 2.0kb upstream 2534 true Chr11: 1453020-1455553 Glycine max
Glyma.11G020600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1453554-1455553 Glycine max
Glyma.11G020600 2.0kb downstream 2.0kb downstream 2534 true Chr11: 1451020-1453553 Glycine max
Glyma.11G020600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1451020-1453019 Glycine max
Glyma.11G020600 5.0kb upstream 5.0kb upstream 5534 true Chr11: 1453020-1458553 Glycine max
Glyma.11G020600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1453554-1458553 Glycine max
Glyma.11G020600 5.0kb downstream 5.0kb downstream 5534 true Chr11: 1448020-1453553 Glycine max
Glyma.11G020600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1448020-1453019 Glycine max
Glyma.11G020600 10.0kb upstream 10.0kb upstream 10534 true Chr11: 1453020-1463553 Glycine max
Glyma.11G020600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1453554-1463553 Glycine max
Glyma.11G020600 10.0kb downstream 10.0kb downstream 10534 true Chr11: 1443020-1453553 Glycine max
Glyma.11G020600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1443020-1453019 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780155 5273 Angiosperm View MSA
122310049 5265 Fabidae View MSA
124074311 5270 Rosid View MSA
123745303 5271 Pentapetalae View MSA
122771446 5272 Eudicot View MSA
121051779 5274 Embryophyte View MSA
123091853 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.114078 0.0 0.486143 Low  
cufflinks 2.18012 0.0 8.07612   High
cufflinks 0.108478 0.0 0.464138 Low  
cufflinks 0.612349 0.0 2.39907    
cufflinks 0.0939953 0.0 0.405864 Low  
cufflinks 0.526366 0.0 2.07393    
cufflinks 0.393026 0.0 1.5644    
cufflinks 0.160995 0.0 0.666719 Low  
cufflinks 0.0545216 0.0 0.246601 Low Low
cufflinks 0.365        
cufflinks 0.465        
cufflinks 0.354        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.247        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.963       High
cufflinks 2.787       High
cufflinks 0.163        
cufflinks 0.368        
cufflinks 0.082     Low Low
cufflinks 0.371        
cufflinks 0.541        
cufflinks 0.16        
cufflinks 0.054     Low Low

0 Strain