Gene : Glyma.11G013800 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR13675:SF1 - EXPRESSED PROTEIN Genomic Order:  138
Name:  ? Glyma.11G013800 Secondary Identifier:  ? PAC:30528871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G013800 0.5kb upstream 0.5kb upstream 1634 true Chr11: 943507-945140 Glycine max
Glyma.11G013800 0.5kb upstream 0.5kb upstream 500 false Chr11: 943507-944006 Glycine max
Glyma.11G013800 0.5kb downstream 0.5kb downstream 1634 true Chr11: 944007-945640 Glycine max
Glyma.11G013800 0.5kb downstream 0.5kb downstream 500 false Chr11: 945141-945640 Glycine max
Glyma.11G013800 1.0kb upstream 1.0kb upstream 2134 true Chr11: 943007-945140 Glycine max
Glyma.11G013800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 943007-944006 Glycine max
Glyma.11G013800 1.0kb downstream 1.0kb downstream 2134 true Chr11: 944007-946140 Glycine max
Glyma.11G013800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 945141-946140 Glycine max
Glyma.11G013800 2.0kb upstream 2.0kb upstream 3134 true Chr11: 942007-945140 Glycine max
Glyma.11G013800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 942007-944006 Glycine max
Glyma.11G013800 2.0kb downstream 2.0kb downstream 3134 true Chr11: 944007-947140 Glycine max
Glyma.11G013800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 945141-947140 Glycine max
Glyma.11G013800 5.0kb upstream 5.0kb upstream 6134 true Chr11: 939007-945140 Glycine max
Glyma.11G013800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 939007-944006 Glycine max
Glyma.11G013800 5.0kb downstream 5.0kb downstream 6134 true Chr11: 944007-950140 Glycine max
Glyma.11G013800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 945141-950140 Glycine max
Glyma.11G013800 10.0kb upstream 10.0kb upstream 11134 true Chr11: 934007-945140 Glycine max
Glyma.11G013800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 934007-944006 Glycine max
Glyma.11G013800 10.0kb downstream 10.0kb downstream 11134 true Chr11: 944007-955140 Glycine max
Glyma.11G013800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 945141-955140 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299214 5265 Fabidae View MSA
124066856 5270 Rosid View MSA
123746501 5271 Pentapetalae View MSA
122793863 5272 Eudicot View MSA
122045056 5273 Angiosperm View MSA
121351084 5274 Embryophyte View MSA
123425666 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.46698 0.0 23.3263    
cufflinks 8.06157 0.0 24.9094    
cufflinks 6.96309 0.0 21.9574    
cufflinks 5.43183 0.0 17.7023   Low
cufflinks 10.5196 0.0 31.2326   High
cufflinks 10.0308 0.0 30.0329   High
cufflinks 5.22634 0.0 17.1272   Low
cufflinks 9.61688 0.0 28.9664    
cufflinks 7.49519 0.0 23.3725    
cufflinks 5.336       High
cufflinks 1.307       Low
cufflinks 3.705        
cufflinks 6.642       High
cufflinks 9.037     High High
cufflinks 0.828       Low
cufflinks 3.16        
cufflinks 2.068        
cufflinks 4.179        
cufflinks 3.658        
cufflinks 2.218        
cufflinks 1.332       Low
cufflinks 2.304        
cufflinks 2.932        
cufflinks 1.796        
cufflinks 2.029        
cufflinks 2.22        

0 Strain