Gene : Glyma.11G015300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11097:SF14 - EXOSOME COMPLEX COMPONENT RRP45 Genomic Order:  153
Name:  ? Glyma.11G015300 Secondary Identifier:  ? PAC:30528921
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G015300 0.5kb upstream 0.5kb upstream 7767 true Chr11: 1047622-1055388 Glycine max
Glyma.11G015300 0.5kb upstream 0.5kb upstream 500 false Chr11: 1047622-1048121 Glycine max
Glyma.11G015300 0.5kb downstream 0.5kb downstream 7767 true Chr11: 1048122-1055888 Glycine max
Glyma.11G015300 0.5kb downstream 0.5kb downstream 500 false Chr11: 1055389-1055888 Glycine max
Glyma.11G015300 1.0kb upstream 1.0kb upstream 8267 true Chr11: 1047122-1055388 Glycine max
Glyma.11G015300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 1047122-1048121 Glycine max
Glyma.11G015300 1.0kb downstream 1.0kb downstream 8267 true Chr11: 1048122-1056388 Glycine max
Glyma.11G015300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 1055389-1056388 Glycine max
Glyma.11G015300 2.0kb upstream 2.0kb upstream 9267 true Chr11: 1046122-1055388 Glycine max
Glyma.11G015300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 1046122-1048121 Glycine max
Glyma.11G015300 2.0kb downstream 2.0kb downstream 9267 true Chr11: 1048122-1057388 Glycine max
Glyma.11G015300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 1055389-1057388 Glycine max
Glyma.11G015300 5.0kb upstream 5.0kb upstream 12267 true Chr11: 1043122-1055388 Glycine max
Glyma.11G015300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 1043122-1048121 Glycine max
Glyma.11G015300 5.0kb downstream 5.0kb downstream 12267 true Chr11: 1048122-1060388 Glycine max
Glyma.11G015300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 1055389-1060388 Glycine max
Glyma.11G015300 10.0kb upstream 10.0kb upstream 17267 true Chr11: 1038122-1055388 Glycine max
Glyma.11G015300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 1038122-1048121 Glycine max
Glyma.11G015300 10.0kb downstream 10.0kb downstream 17267 true Chr11: 1048122-1065388 Glycine max
Glyma.11G015300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 1055389-1065388 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040877 5273 Angiosperm View MSA
122303739 5265 Fabidae View MSA
124064668 5270 Rosid View MSA
123744481 5271 Pentapetalae View MSA
122787002 5272 Eudicot View MSA
121343875 5274 Embryophyte View MSA
123425842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.99751 0.0 30.6039    
cufflinks 6.34634 0.0 25.7888    
cufflinks 4.37983 0.0 20.1142   Low
cufflinks 6.40633 0.0 26.3359    
cufflinks 7.9875 0.0 31.0276    
cufflinks 3.79129 0.0 15.6072   Low
cufflinks 7.88562 0.0 31.8607    
cufflinks 6.86001 0.0 26.7834    
cufflinks 7.23027 0.0 29.4803    
cufflinks 0.853        
cufflinks 0.498       Low
cufflinks 1.063        
cufflinks 1.089       High
cufflinks 1.417       High
cufflinks 0.804        
cufflinks 0.824        
cufflinks 0.639       Low
cufflinks 0.91        
cufflinks 1.203       High
cufflinks 0.728        
cufflinks 0.738        
cufflinks 0.759        
cufflinks 1.056        
cufflinks 0.634       Low
cufflinks 0.695        
cufflinks 0.738        

0 Strain