Gene : Glyma.11G006600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11830 - 40S RIBOSOMAL PROTEIN S3A Genomic Order:  66
Name:  ? Glyma.11G006600 Secondary Identifier:  ? PAC:30528745
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G006600 0.5kb upstream 0.5kb upstream 2773 true Chr11: 463253-466025 Glycine max
Glyma.11G006600 0.5kb upstream 0.5kb upstream 500 false Chr11: 463253-463752 Glycine max
Glyma.11G006600 0.5kb downstream 0.5kb downstream 2773 true Chr11: 463753-466525 Glycine max
Glyma.11G006600 0.5kb downstream 0.5kb downstream 500 false Chr11: 466026-466525 Glycine max
Glyma.11G006600 1.0kb upstream 1.0kb upstream 3273 true Chr11: 462753-466025 Glycine max
Glyma.11G006600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 462753-463752 Glycine max
Glyma.11G006600 1.0kb downstream 1.0kb downstream 3273 true Chr11: 463753-467025 Glycine max
Glyma.11G006600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 466026-467025 Glycine max
Glyma.11G006600 2.0kb upstream 2.0kb upstream 4273 true Chr11: 461753-466025 Glycine max
Glyma.11G006600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 461753-463752 Glycine max
Glyma.11G006600 2.0kb downstream 2.0kb downstream 4273 true Chr11: 463753-468025 Glycine max
Glyma.11G006600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 466026-468025 Glycine max
Glyma.11G006600 5.0kb upstream 5.0kb upstream 7273 true Chr11: 458753-466025 Glycine max
Glyma.11G006600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 458753-463752 Glycine max
Glyma.11G006600 5.0kb downstream 5.0kb downstream 7273 true Chr11: 463753-471025 Glycine max
Glyma.11G006600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 466026-471025 Glycine max
Glyma.11G006600 10.0kb upstream 10.0kb upstream 12273 true Chr11: 453753-466025 Glycine max
Glyma.11G006600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 453753-463752 Glycine max
Glyma.11G006600 10.0kb downstream 10.0kb downstream 12273 true Chr11: 463753-476025 Glycine max
Glyma.11G006600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 466026-476025 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307732 5265 Fabidae View MSA
124066895 5270 Rosid View MSA
123743383 5271 Pentapetalae View MSA
122787922 5272 Eudicot View MSA
122049456 5273 Angiosperm View MSA
121347467 5274 Embryophyte View MSA
123424177 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 99.015 0.0 289.554 High  
cufflinks 100.491 0.0 294.111 High  
cufflinks 48.6026 0.0 132.083 High Low
cufflinks 86.7386 0.0 249.39 High  
cufflinks 189.047 0.0 618.062 High High
cufflinks 121.848 0.0 367.095 High  
cufflinks 259.277 0.0 907.511 High High
cufflinks 90.0032 0.0 260.424 High  
cufflinks 133.935 0.0 410.194 High  
cufflinks 62.214     High  
cufflinks 16.583     High Low
cufflinks 53.109     High  
cufflinks 160.31     High High
cufflinks 238.722     High High
cufflinks 29.57     High  
cufflinks 48.197     High  
cufflinks 37.815     High  
cufflinks 58.872     High  
cufflinks 68.994     High  
cufflinks 33.774     High  
cufflinks 29.816     High  
cufflinks 37.461     High  
cufflinks 70.483     High  
cufflinks 20.646     High Low
cufflinks 44.417     High  
cufflinks 40.716     High  

0 Strain