Gene : Glyma.11G008000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33044:SF23 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  80
Name:  ? Glyma.11G008000 Secondary Identifier:  ? PAC:30530318
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G008000 0.5kb upstream 0.5kb upstream 2702 true Chr11: 552834-555535 Glycine max
Glyma.11G008000 0.5kb upstream 0.5kb upstream 500 false Chr11: 552834-553333 Glycine max
Glyma.11G008000 0.5kb downstream 0.5kb downstream 2702 true Chr11: 553334-556035 Glycine max
Glyma.11G008000 0.5kb downstream 0.5kb downstream 500 false Chr11: 555536-556035 Glycine max
Glyma.11G008000 1.0kb upstream 1.0kb upstream 3202 true Chr11: 552334-555535 Glycine max
Glyma.11G008000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 552334-553333 Glycine max
Glyma.11G008000 1.0kb downstream 1.0kb downstream 3202 true Chr11: 553334-556535 Glycine max
Glyma.11G008000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 555536-556535 Glycine max
Glyma.11G008000 2.0kb upstream 2.0kb upstream 4202 true Chr11: 551334-555535 Glycine max
Glyma.11G008000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 551334-553333 Glycine max
Glyma.11G008000 2.0kb downstream 2.0kb downstream 4202 true Chr11: 553334-557535 Glycine max
Glyma.11G008000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 555536-557535 Glycine max
Glyma.11G008000 5.0kb upstream 5.0kb upstream 7202 true Chr11: 548334-555535 Glycine max
Glyma.11G008000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 548334-553333 Glycine max
Glyma.11G008000 5.0kb downstream 5.0kb downstream 7202 true Chr11: 553334-560535 Glycine max
Glyma.11G008000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 555536-560535 Glycine max
Glyma.11G008000 10.0kb upstream 10.0kb upstream 12202 true Chr11: 543334-555535 Glycine max
Glyma.11G008000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 543334-553333 Glycine max
Glyma.11G008000 10.0kb downstream 10.0kb downstream 12202 true Chr11: 553334-565535 Glycine max
Glyma.11G008000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 555536-565535 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301853 5265 Fabidae View MSA
124071841 5270 Rosid View MSA
123750457 5271 Pentapetalae View MSA
122796784 5272 Eudicot View MSA
122044405 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.22802 0.0 13.9106    
cufflinks 3.64611 0.0 16.8674    
cufflinks 11.116 0.0 39.5703    
cufflinks 0.235169 0.0 3.80156   Low
cufflinks 17.1444 0.0 60.9549    
cufflinks 13.1518 0.0 43.5605    
cufflinks 0.224152 0.0 3.79804   Low
cufflinks 3.76767 0.0 18.155    
cufflinks 16.8377 0.0 57.5876    
cufflinks 0.324        
cufflinks 9.202     High  
cufflinks 6.956        
cufflinks 12.548     High  
cufflinks 0.946        
cufflinks 0.616        
cufflinks 0.246       Low
cufflinks 31.198     High High
cufflinks 10.91     High  
cufflinks 2.045        
cufflinks 0.179       Low
cufflinks 12.023     High  
cufflinks 0.216       Low
cufflinks 0.419        
cufflinks 32.864     High High
cufflinks 0.133       Low
cufflinks 21.249     High High

0 Strain