Gene : Glyma.11G010600 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  106
Name:  ? Glyma.11G010600 Secondary Identifier:  ? PAC:30529895
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G010600 0.5kb upstream 0.5kb upstream 3154 true Chr11: 742559-745712 Glycine max
Glyma.11G010600 0.5kb upstream 0.5kb upstream 500 false Chr11: 742559-743058 Glycine max
Glyma.11G010600 0.5kb downstream 0.5kb downstream 3154 true Chr11: 743059-746212 Glycine max
Glyma.11G010600 0.5kb downstream 0.5kb downstream 500 false Chr11: 745713-746212 Glycine max
Glyma.11G010600 1.0kb upstream 1.0kb upstream 3654 true Chr11: 742059-745712 Glycine max
Glyma.11G010600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 742059-743058 Glycine max
Glyma.11G010600 1.0kb downstream 1.0kb downstream 3654 true Chr11: 743059-746712 Glycine max
Glyma.11G010600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 745713-746712 Glycine max
Glyma.11G010600 2.0kb upstream 2.0kb upstream 4654 true Chr11: 741059-745712 Glycine max
Glyma.11G010600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 741059-743058 Glycine max
Glyma.11G010600 2.0kb downstream 2.0kb downstream 4654 true Chr11: 743059-747712 Glycine max
Glyma.11G010600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 745713-747712 Glycine max
Glyma.11G010600 5.0kb upstream 5.0kb upstream 7654 true Chr11: 738059-745712 Glycine max
Glyma.11G010600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 738059-743058 Glycine max
Glyma.11G010600 5.0kb downstream 5.0kb downstream 7654 true Chr11: 743059-750712 Glycine max
Glyma.11G010600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 745713-750712 Glycine max
Glyma.11G010600 10.0kb upstream 10.0kb upstream 12654 true Chr11: 733059-745712 Glycine max
Glyma.11G010600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 733059-743058 Glycine max
Glyma.11G010600 10.0kb downstream 10.0kb downstream 12654 true Chr11: 743059-755712 Glycine max
Glyma.11G010600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 745713-755712 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309547 5265 Fabidae View MSA
124069312 5270 Rosid View MSA
123753292 5271 Pentapetalae View MSA
122796166 5272 Eudicot View MSA
122047965 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310823 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0375025 0.0 0.169606 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0231415 0.0 0.109488 Low Low
cufflinks 0.12132 0.0 0.49962 Low  
cufflinks 0.0953113 0.0 0.398863 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.297352 0.0 1.17859   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0372608 0.0 0.16853 Low  
cufflinks 0.023     Low Low
cufflinks 0.049     Low  
cufflinks 0.012     Low Low
cufflinks 0.025     Low  
cufflinks 0.025     Low  
cufflinks 0.043     Low  
cufflinks 0.037     Low  
cufflinks 0.038     Low  
cufflinks 0.04     Low  
cufflinks 0.072     Low High
cufflinks 0.02     Low Low
cufflinks 0.061     Low  
cufflinks 0.062     Low  
cufflinks 0.056     Low  
cufflinks 0.092       High
cufflinks 0.041     Low  
cufflinks 0.061     Low  

0 Strain