Protein Family : RNA binding (RRM/RBD/RNP motifs) family protein 124069312

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  53

53 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
30032.t000019 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1312   30032: 117818-119129
30055.t000068 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) R. communis v0.1 1976   30055: 358373-360348
Cucsa.241400 (1 of 8) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. sativus v1.0 3223   scaffold02047: 1418659-1421881
orange1.1g048030m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 440   scaffold00918: 40534-40973
orange1.1g032812m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1506   scaffold02155: 989-2494
orange1.1g032528m.g (1 of 186) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. sinensis v1.1 1537   scaffold00018: 351734-353270
AT5G06210 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1270   Chr5: 1878471-1879740
AT2G27330 (1 of 234) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. thaliana TAIR10 1599   Chr2: 11695032-11696630
Thhalv10014928m.g (1 of 230) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) E. salsugineum v1.0 1400   scaffold_2: 1851113-1852512
Ciclev10012994m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 2096   scaffold_6: 20226864-20228959
Ciclev10029552m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1622   scaffold_8: 19132837-19134458
Ciclev10023396m.g (1 of 192) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. clementina v1.0 1273   scaffold_3: 31457875-31459147
Ciclev10024110m.g (1 of 4) KOG0114 - Predicted RNA-binding protein (RRM superfamily) C. clementina v1.0 1384   scaffold_3: 31429769-31431152
Lus10013306.g (1 of 373) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) L. usitatissimum v1.0 1442   scaffold812: 55722-57163
Gorai.006G152700 (1 of 7) KOG0121 - Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. raimondii v2.1 1702   Chr06: 41157674-41159375
Thecc1EG022707 (1 of 13) KOG0114 - Predicted RNA-binding protein (RRM superfamily) T. cacao v1.1 1914   scaffold_5: 6767465-6769378
Thecc1EG041357 (1 of 1) K13195 - cold-inducible RNA-binding protein (CIRBP) T. cacao v1.1 1898   scaffold_9: 37222756-37224653
Araha.9394s0005 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) A. halleri v1.1 1220   Scaffold9394: 11310-12529
Cagra.2117s0042 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1226   Scaffold2117: 159073-160298
Cagra.3125s0009 (1 of 222) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) C. grandiflora v1.1 1695   Scaffold3125: 38508-40202
Glyma.11G010600 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 2654   Chr11: 743059-745712
Glyma.01G232300 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 3124   Chr01: 55884330-55887453
Glyma.03G198500 (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) G. max Wm82.a2.v1 1768   Chr03: 40774384-40776151
Brara.B00201 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1164   A02: 976938-978101
Brara.C02431 (1 of 340) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. rapa FPsc v1.3 1766   A03: 12209197-12210962
Bostr.28794s0032 (1 of 9) KOG0114 - Predicted RNA-binding protein (RRM superfamily) B. stricta v1.2 2028   Scaffold28794: 250872-252899
Bostr.13129s0353 (1 of 225) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) B. stricta v1.2 1311   Scaffold13129: 1624827-1626137
Medtr3g029580 (1 of 243) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) M. truncatula Mt4.0v1 1691   chr3: 9308768-9310458
Medtr7g105260 (1 of 6) KOG0114 - Predicted RNA-binding protein (RRM superfamily) M. truncatula Mt4.0v1 2124   chr7: 42674424-42676547
SapurV1A.1211s0070 (1 of 4) K13195 - cold-inducible RNA-binding protein (CIRBP) S. purpurea v1.0 2163   chr06: 15138144-15140306

53 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
30032.m000469 R. communis v0.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Lus10013306 L. usitatissimum v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Cagra.2117s0042.1.p C. grandiflora v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Glyma.01G232300.1.p G. max Wm82.a2.v1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
Medtr7g105260.1 M. truncatula Mt4.0v1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
SapurV1A.1211s0070.1.p S. purpurea v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Prupe.7G101000.1.p P. persica v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
AL6G16210.t1 A. lyrata v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Tp57577_TGAC_v2_mRNA24150 T. pratense v2 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Tp57577_TGAC_v2_mRNA12584 T. pratense v2 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Phvul.001G192800.1.p P. vulgaris v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Podel.09G166400.1.p P. deltoides WV94 v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
VIT_206s0080g00870.2 V. vinifera v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Carub.0004s0796.1.p C. rubella v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Ca_00822 C. arietinum v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
gene37666-v2.0.a2-hybrid.t1 F. vesca v2.0.a2 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
30055.m001598 R. communis v0.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Cucsa.241400.1 C. sativus v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
orange1.1g048030m C. sinensis v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
orange1.1g032528m C. sinensis v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
orange1.1g032812m C. sinensis v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 3 5270 Rosid
AT2G27330.1 A. thaliana TAIR10 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
AT5G06210.1 A. thaliana TAIR10 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid
Thhalv10014928m E. salsugineum v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Ciclev10024110m C. clementina v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Ciclev10029552m C. clementina v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Ciclev10023396m C. clementina v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Ciclev10012994m C. clementina v1.0 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 4 5270 Rosid
Gorai.006G152700.1 G. raimondii v2.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 1 5270 Rosid
Thecc1EG022707t6 T. cacao v1.1 124069312 RNA binding (RRM/RBD/RNP motifs) family protein 2 5270 Rosid