Gene : Glyma.03G198500 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  1985
Name:  ? Glyma.03G198500 Secondary Identifier:  ? PAC:30516631
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.03G198500 0.5kb upstream 0.5kb upstream 2268 true Chr03: 40773884-40776151 Glycine max
Glyma.03G198500 0.5kb upstream 0.5kb upstream 500 false Chr03: 40773884-40774383 Glycine max
Glyma.03G198500 0.5kb downstream 0.5kb downstream 2268 true Chr03: 40774384-40776651 Glycine max
Glyma.03G198500 0.5kb downstream 0.5kb downstream 500 false Chr03: 40776152-40776651 Glycine max
Glyma.03G198500 1.0kb upstream 1.0kb upstream 2768 true Chr03: 40773384-40776151 Glycine max
Glyma.03G198500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 40773384-40774383 Glycine max
Glyma.03G198500 1.0kb downstream 1.0kb downstream 2768 true Chr03: 40774384-40777151 Glycine max
Glyma.03G198500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 40776152-40777151 Glycine max
Glyma.03G198500 2.0kb upstream 2.0kb upstream 3768 true Chr03: 40772384-40776151 Glycine max
Glyma.03G198500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 40772384-40774383 Glycine max
Glyma.03G198500 2.0kb downstream 2.0kb downstream 3768 true Chr03: 40774384-40778151 Glycine max
Glyma.03G198500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 40776152-40778151 Glycine max
Glyma.03G198500 5.0kb upstream 5.0kb upstream 6768 true Chr03: 40769384-40776151 Glycine max
Glyma.03G198500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 40769384-40774383 Glycine max
Glyma.03G198500 5.0kb downstream 5.0kb downstream 6768 true Chr03: 40774384-40781151 Glycine max
Glyma.03G198500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 40776152-40781151 Glycine max
Glyma.03G198500 10.0kb upstream 10.0kb upstream 11768 true Chr03: 40764384-40776151 Glycine max
Glyma.03G198500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 40764384-40774383 Glycine max
Glyma.03G198500 10.0kb downstream 10.0kb downstream 11768 true Chr03: 40774384-40786151 Glycine max
Glyma.03G198500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 40776152-40786151 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307876 5265 Fabidae View MSA
124069312 5270 Rosid View MSA
123753292 5271 Pentapetalae View MSA
122796166 5272 Eudicot View MSA
122047965 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310823 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8995 0.0 57.7468   High
cufflinks 9.92956 0.0 29.8329    
cufflinks 8.27681 0.0 25.3357   Low
cufflinks 8.5792 0.0 26.2849   Low
cufflinks 12.8403 0.0 37.3373    
cufflinks 13.4013 0.0 38.7605    
cufflinks 12.4128 0.0 36.3011    
cufflinks 11.5106 0.0 33.8316    
cufflinks 11.8224 0.0 34.6423    
cufflinks 3.65        
cufflinks 2.969        
cufflinks 5.348       High
cufflinks 5.72       High
cufflinks 7.629     High High
cufflinks 2.999        
cufflinks 2.495       Low
cufflinks 3.666        
cufflinks 4.531        
cufflinks 4.079        
cufflinks 2.559       Low
cufflinks 2.964        
cufflinks 2.81        
cufflinks 4.234        
cufflinks 3.686        
cufflinks 2.736        
cufflinks 2.295       Low

0 Strain