Gene : Glyma.01G232300 G. max Wm82.a2.v1
Defline:  (1 of 477) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) Genomic Order:  2323
Name:  ? Glyma.01G232300 Secondary Identifier:  ? PAC:30544836
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.01G232300 0.5kb upstream 0.5kb upstream 3624 true Chr01: 55884330-55887953 Glycine max
Glyma.01G232300 0.5kb upstream 0.5kb upstream 500 false Chr01: 55887454-55887953 Glycine max
Glyma.01G232300 0.5kb downstream 0.5kb downstream 3624 true Chr01: 55883830-55887453 Glycine max
Glyma.01G232300 0.5kb downstream 0.5kb downstream 500 false Chr01: 55883830-55884329 Glycine max
Glyma.01G232300 1.0kb upstream 1.0kb upstream 4124 true Chr01: 55884330-55888453 Glycine max
Glyma.01G232300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 55887454-55888453 Glycine max
Glyma.01G232300 1.0kb downstream 1.0kb downstream 4124 true Chr01: 55883330-55887453 Glycine max
Glyma.01G232300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 55883330-55884329 Glycine max
Glyma.01G232300 2.0kb upstream 2.0kb upstream 5124 true Chr01: 55884330-55889453 Glycine max
Glyma.01G232300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 55887454-55889453 Glycine max
Glyma.01G232300 2.0kb downstream 2.0kb downstream 5124 true Chr01: 55882330-55887453 Glycine max
Glyma.01G232300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 55882330-55884329 Glycine max
Glyma.01G232300 5.0kb upstream 5.0kb upstream 8124 true Chr01: 55884330-55892453 Glycine max
Glyma.01G232300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 55887454-55892453 Glycine max
Glyma.01G232300 5.0kb downstream 5.0kb downstream 8124 true Chr01: 55879330-55887453 Glycine max
Glyma.01G232300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 55879330-55884329 Glycine max
Glyma.01G232300 10.0kb upstream 10.0kb upstream 13124 true Chr01: 55884330-55897453 Glycine max
Glyma.01G232300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 55887454-55897453 Glycine max
Glyma.01G232300 10.0kb downstream 10.0kb downstream 13124 true Chr01: 55874330-55887453 Glycine max
Glyma.01G232300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 55874330-55884329 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309547 5265 Fabidae View MSA
124069312 5270 Rosid View MSA
123753292 5271 Pentapetalae View MSA
122796166 5272 Eudicot View MSA
122047965 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121310823 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2269 0.0 30.5227    
cufflinks 8.15328 0.0 25.0558   Low
cufflinks 8.9357 0.0 26.9759    
cufflinks 10.6091 0.0 31.3815    
cufflinks 8.78935 0.0 26.8206    
cufflinks 7.64606 0.0 23.7793   Low
cufflinks 13.3404 0.0 38.5066   High
cufflinks 10.416 0.0 30.9178    
cufflinks 10.3436 0.0 30.7227    
cufflinks 2.018       Low
cufflinks 1.897       Low
cufflinks 3.388       High
cufflinks 2.817        
cufflinks 2.896        
cufflinks 3.09        
cufflinks 2.849        
cufflinks 2.099        
cufflinks 3.208        
cufflinks 2.77        
cufflinks 3.746       High
cufflinks 1.758       Low
cufflinks 3.442       High
cufflinks 2.643        
cufflinks 2.112        
cufflinks 3.565       High
cufflinks 1.885       Low

0 Strain