Gene : Glyma.11G048600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR23213//PTHR23213:SF215 - FORMIN-RELATED Genomic Order:  486
Name:  ? Glyma.11G048600 Secondary Identifier:  ? PAC:30531594
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G048600 0.5kb upstream 0.5kb upstream 5774 true Chr11: 3634128-3639901 Glycine max
Glyma.11G048600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3639402-3639901 Glycine max
Glyma.11G048600 0.5kb downstream 0.5kb downstream 5774 true Chr11: 3633628-3639401 Glycine max
Glyma.11G048600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3633628-3634127 Glycine max
Glyma.11G048600 1.0kb upstream 1.0kb upstream 6274 true Chr11: 3634128-3640401 Glycine max
Glyma.11G048600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3639402-3640401 Glycine max
Glyma.11G048600 1.0kb downstream 1.0kb downstream 6274 true Chr11: 3633128-3639401 Glycine max
Glyma.11G048600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3633128-3634127 Glycine max
Glyma.11G048600 2.0kb upstream 2.0kb upstream 7274 true Chr11: 3634128-3641401 Glycine max
Glyma.11G048600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3639402-3641401 Glycine max
Glyma.11G048600 2.0kb downstream 2.0kb downstream 7274 true Chr11: 3632128-3639401 Glycine max
Glyma.11G048600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3632128-3634127 Glycine max
Glyma.11G048600 5.0kb upstream 5.0kb upstream 10274 true Chr11: 3634128-3644401 Glycine max
Glyma.11G048600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3639402-3644401 Glycine max
Glyma.11G048600 5.0kb downstream 5.0kb downstream 10274 true Chr11: 3629128-3639401 Glycine max
Glyma.11G048600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3629128-3634127 Glycine max
Glyma.11G048600 10.0kb upstream 10.0kb upstream 15274 true Chr11: 3634128-3649401 Glycine max
Glyma.11G048600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3639402-3649401 Glycine max
Glyma.11G048600 10.0kb downstream 10.0kb downstream 15274 true Chr11: 3624128-3639401 Glycine max
Glyma.11G048600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3624128-3634127 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310701 5265 Fabidae View MSA
124065338 5270 Rosid View MSA
123747002 5271 Pentapetalae View MSA
122786899 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.33907 0.0 9.29578    
cufflinks 4.93764 0.0 13.3662    
cufflinks 9.2004 0.0 24.5537   High
cufflinks 7.06195 0.0 18.8652    
cufflinks 4.54992 0.0 12.3541    
cufflinks 3.01622 0.0 8.4773    
cufflinks 3.72681 0.0 10.2786    
cufflinks 14.2978 0.0 38.7616   High
cufflinks 2.45714 0.0 7.06429   Low
cufflinks 8.981     High High
cufflinks 0.347       Low
cufflinks 6.413       High
cufflinks 2.966        
cufflinks 1.704        
cufflinks 0.078       Low
cufflinks 2.408        
cufflinks 2.536        
cufflinks 4.582        
cufflinks 3.906        
cufflinks 1.92        
cufflinks 0.479        
cufflinks 2.526        
cufflinks 3.403        
cufflinks 0.25       Low
cufflinks 1.749        
cufflinks 1.071        

0 Strain