Gene : Glyma.11G054000 G. max Wm82.a2.v1
Genomic Order:  540 Name:  ? Glyma.11G054000
Secondary Identifier:  ? PAC:30530421
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G054000 0.5kb upstream 0.5kb upstream 2949 true Chr11: 4070722-4073670 Glycine max
Glyma.11G054000 0.5kb upstream 0.5kb upstream 500 false Chr11: 4073171-4073670 Glycine max
Glyma.11G054000 0.5kb downstream 0.5kb downstream 2949 true Chr11: 4070222-4073170 Glycine max
Glyma.11G054000 0.5kb downstream 0.5kb downstream 500 false Chr11: 4070222-4070721 Glycine max
Glyma.11G054000 1.0kb upstream 1.0kb upstream 3449 true Chr11: 4070722-4074170 Glycine max
Glyma.11G054000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4073171-4074170 Glycine max
Glyma.11G054000 1.0kb downstream 1.0kb downstream 3449 true Chr11: 4069722-4073170 Glycine max
Glyma.11G054000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4069722-4070721 Glycine max
Glyma.11G054000 2.0kb upstream 2.0kb upstream 4449 true Chr11: 4070722-4075170 Glycine max
Glyma.11G054000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4073171-4075170 Glycine max
Glyma.11G054000 2.0kb downstream 2.0kb downstream 4449 true Chr11: 4068722-4073170 Glycine max
Glyma.11G054000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4068722-4070721 Glycine max
Glyma.11G054000 5.0kb upstream 5.0kb upstream 7449 true Chr11: 4070722-4078170 Glycine max
Glyma.11G054000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4073171-4078170 Glycine max
Glyma.11G054000 5.0kb downstream 5.0kb downstream 7449 true Chr11: 4065722-4073170 Glycine max
Glyma.11G054000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4065722-4070721 Glycine max
Glyma.11G054000 10.0kb upstream 10.0kb upstream 12449 true Chr11: 4070722-4083170 Glycine max
Glyma.11G054000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4073171-4083170 Glycine max
Glyma.11G054000 10.0kb downstream 10.0kb downstream 12449 true Chr11: 4060722-4073170 Glycine max
Glyma.11G054000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4060722-4070721 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304795 5265 Fabidae View MSA
124071016 5270 Rosid View MSA
123737154 5271 Pentapetalae View MSA
122787173 5272 Eudicot View MSA
122047813 5273 Angiosperm View MSA
121346438 5274 Embryophyte View MSA
123423835 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.97396 0.0 24.9672   High
cufflinks 4.85153 0.0 14.5276    
cufflinks 1.21842 0.0 4.30907   Low
cufflinks 3.31068 0.0 10.4505    
cufflinks 3.1108 0.0 9.91059    
cufflinks 1.53187 0.0 5.31813    
cufflinks 3.58121 0.0 11.2195    
cufflinks 1.31649 0.0 4.63669   Low
cufflinks 1.97895 0.0 6.69828    
cufflinks 1.33        
cufflinks 0.118       Low
cufflinks 2.782        
cufflinks 2.456        
cufflinks 3.526        
cufflinks 0.511        
cufflinks 8.385     High High
cufflinks 0.261       Low
cufflinks 3.612        
cufflinks 4.521        
cufflinks 7.587     High High
cufflinks 0.346       Low
cufflinks 7.488     High High
cufflinks 7.484     High High
cufflinks 0.232       Low
cufflinks 8.361     High High
cufflinks 0.44        

0 Strain