Gene : Glyma.11G041400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR19282//PTHR19282:SF262 - TETRASPANIN Genomic Order:  414
Name:  ? Glyma.11G041400 Secondary Identifier:  ? PAC:30529087
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G041400 0.5kb upstream 0.5kb upstream 5619 true Chr11: 3026850-3032468 Glycine max
Glyma.11G041400 0.5kb upstream 0.5kb upstream 500 false Chr11: 3026850-3027349 Glycine max
Glyma.11G041400 0.5kb downstream 0.5kb downstream 5619 true Chr11: 3027350-3032968 Glycine max
Glyma.11G041400 0.5kb downstream 0.5kb downstream 500 false Chr11: 3032469-3032968 Glycine max
Glyma.11G041400 1.0kb upstream 1.0kb upstream 6119 true Chr11: 3026350-3032468 Glycine max
Glyma.11G041400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3026350-3027349 Glycine max
Glyma.11G041400 1.0kb downstream 1.0kb downstream 6119 true Chr11: 3027350-3033468 Glycine max
Glyma.11G041400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3032469-3033468 Glycine max
Glyma.11G041400 2.0kb upstream 2.0kb upstream 7119 true Chr11: 3025350-3032468 Glycine max
Glyma.11G041400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3025350-3027349 Glycine max
Glyma.11G041400 2.0kb downstream 2.0kb downstream 7119 true Chr11: 3027350-3034468 Glycine max
Glyma.11G041400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3032469-3034468 Glycine max
Glyma.11G041400 5.0kb upstream 5.0kb upstream 10119 true Chr11: 3022350-3032468 Glycine max
Glyma.11G041400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3022350-3027349 Glycine max
Glyma.11G041400 5.0kb downstream 5.0kb downstream 10119 true Chr11: 3027350-3037468 Glycine max
Glyma.11G041400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3032469-3037468 Glycine max
Glyma.11G041400 10.0kb upstream 10.0kb upstream 15119 true Chr11: 3017350-3032468 Glycine max
Glyma.11G041400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3017350-3027349 Glycine max
Glyma.11G041400 10.0kb downstream 10.0kb downstream 15119 true Chr11: 3027350-3042468 Glycine max
Glyma.11G041400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3032469-3042468 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314300 5265 Fabidae View MSA
124065519 5270 Rosid View MSA
123751107 5271 Pentapetalae View MSA
122796943 5272 Eudicot View MSA
122050104 5273 Angiosperm View MSA
121351335 5274 Embryophyte View MSA
123424447 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.8063 0.0 34.732   High
cufflinks 6.84782 0.0 19.631    
cufflinks 12.3059 0.0 33.3898   High
cufflinks 6.15285 0.0 17.8538    
cufflinks 6.12136 0.0 17.8047    
cufflinks 4.85105 0.0 14.5126   Low
cufflinks 4.61407 0.0 13.9288   Low
cufflinks 13.0276 0.0 35.2917   High
cufflinks 10.1299 0.0 27.9113    
cufflinks 3.173        
cufflinks 14.321     High High
cufflinks 2.978        
cufflinks 2.092        
cufflinks 1.366       Low
cufflinks 6.067     High High
cufflinks 2.994        
cufflinks 2.258        
cufflinks 2.587        
cufflinks 2.11        
cufflinks 2.323        
cufflinks 4.365        
cufflinks 2.929        
cufflinks 2.975        
cufflinks 10.003     High High
cufflinks 2.794        
cufflinks 3.017        

0 Strain