Gene : Glyma.11G043600 G. max Wm82.a2.v1
Defline:  (1 of 8) KOG4029 - Transcription factor HAND2/Transcription factor TAL1/TAL2/LYL1 Genomic Order:  436
Name:  ? Glyma.11G043600 Secondary Identifier:  ? PAC:30528790
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G043600 0.5kb upstream 0.5kb upstream 3412 true Chr11: 3217280-3220691 Glycine max
Glyma.11G043600 0.5kb upstream 0.5kb upstream 500 false Chr11: 3217280-3217779 Glycine max
Glyma.11G043600 0.5kb downstream 0.5kb downstream 3412 true Chr11: 3217780-3221191 Glycine max
Glyma.11G043600 0.5kb downstream 0.5kb downstream 500 false Chr11: 3220692-3221191 Glycine max
Glyma.11G043600 1.0kb upstream 1.0kb upstream 3912 true Chr11: 3216780-3220691 Glycine max
Glyma.11G043600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 3216780-3217779 Glycine max
Glyma.11G043600 1.0kb downstream 1.0kb downstream 3912 true Chr11: 3217780-3221691 Glycine max
Glyma.11G043600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 3220692-3221691 Glycine max
Glyma.11G043600 2.0kb upstream 2.0kb upstream 4912 true Chr11: 3215780-3220691 Glycine max
Glyma.11G043600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 3215780-3217779 Glycine max
Glyma.11G043600 2.0kb downstream 2.0kb downstream 4912 true Chr11: 3217780-3222691 Glycine max
Glyma.11G043600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 3220692-3222691 Glycine max
Glyma.11G043600 5.0kb upstream 5.0kb upstream 7912 true Chr11: 3212780-3220691 Glycine max
Glyma.11G043600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 3212780-3217779 Glycine max
Glyma.11G043600 5.0kb downstream 5.0kb downstream 7912 true Chr11: 3217780-3225691 Glycine max
Glyma.11G043600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 3220692-3225691 Glycine max
Glyma.11G043600 10.0kb upstream 10.0kb upstream 12912 true Chr11: 3207780-3220691 Glycine max
Glyma.11G043600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 3207780-3217779 Glycine max
Glyma.11G043600 10.0kb downstream 10.0kb downstream 12912 true Chr11: 3217780-3230691 Glycine max
Glyma.11G043600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 3220692-3230691 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313043 5265 Fabidae View MSA
124070459 5270 Rosid View MSA
123749435 5271 Pentapetalae View MSA
122795103 5272 Eudicot View MSA
122042005 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.366998 0.0 1.39041    
cufflinks 2.07032 0.0 6.97187   High
cufflinks 0.167539 0.0 0.656641 Low  
cufflinks 0.539366 0.0 2.00589    
cufflinks 0.0380513 0.0 0.159239 Low Low
cufflinks 0.484023 0.0 1.81099    
cufflinks 0.134418 0.0 0.530789 Low  
cufflinks 0.206357 0.0 0.800774 Low  
cufflinks 0.0301902 0.0 0.128666 Low Low
cufflinks 0.922        
cufflinks 0.284        
cufflinks 0.428        
cufflinks 0.038     Low  
cufflinks 0.021     Low Low
cufflinks 0.046     Low  
cufflinks 4.277       High
cufflinks 0.02     Low Low
cufflinks 0.515        
cufflinks 0.767        
cufflinks 3.554       High
cufflinks 0.019     Low Low
cufflinks 4.254       High
cufflinks 7.642     High High
cufflinks 0.006     Low Low
cufflinks 4.231       High
cufflinks 0.035     Low  

0 Strain