Gene : Glyma.11G035200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR10909:SF250 - PEROXISOMAL ACYL-COENZYME A OXIDASE 2 Genomic Order:  352
Name:  ? Glyma.11G035200 Secondary Identifier:  ? PAC:30529243
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G035200 0.5kb upstream 0.5kb upstream 7392 true Chr11: 2548970-2556361 Glycine max
Glyma.11G035200 0.5kb upstream 0.5kb upstream 500 false Chr11: 2555862-2556361 Glycine max
Glyma.11G035200 0.5kb downstream 0.5kb downstream 7392 true Chr11: 2548470-2555861 Glycine max
Glyma.11G035200 0.5kb downstream 0.5kb downstream 500 false Chr11: 2548470-2548969 Glycine max
Glyma.11G035200 1.0kb upstream 1.0kb upstream 7892 true Chr11: 2548970-2556861 Glycine max
Glyma.11G035200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 2555862-2556861 Glycine max
Glyma.11G035200 1.0kb downstream 1.0kb downstream 7892 true Chr11: 2547970-2555861 Glycine max
Glyma.11G035200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 2547970-2548969 Glycine max
Glyma.11G035200 2.0kb upstream 2.0kb upstream 8892 true Chr11: 2548970-2557861 Glycine max
Glyma.11G035200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 2555862-2557861 Glycine max
Glyma.11G035200 2.0kb downstream 2.0kb downstream 8892 true Chr11: 2546970-2555861 Glycine max
Glyma.11G035200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 2546970-2548969 Glycine max
Glyma.11G035200 5.0kb upstream 5.0kb upstream 11892 true Chr11: 2548970-2560861 Glycine max
Glyma.11G035200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 2555862-2560861 Glycine max
Glyma.11G035200 5.0kb downstream 5.0kb downstream 11892 true Chr11: 2543970-2555861 Glycine max
Glyma.11G035200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 2543970-2548969 Glycine max
Glyma.11G035200 10.0kb upstream 10.0kb upstream 16892 true Chr11: 2548970-2565861 Glycine max
Glyma.11G035200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 2555862-2565861 Glycine max
Glyma.11G035200 10.0kb downstream 10.0kb downstream 16892 true Chr11: 2538970-2555861 Glycine max
Glyma.11G035200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 2538970-2548969 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309482 5265 Fabidae View MSA
124065660 5270 Rosid View MSA
123739070 5271 Pentapetalae View MSA
122787917 5272 Eudicot View MSA
122045798 5273 Angiosperm View MSA
121345655 5274 Embryophyte View MSA
123428216 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.7324 0.0 96.7573 High  
cufflinks 23.8224 0.0 84.6117 High  
cufflinks 34.5963 0.0 132.937 High High
cufflinks 30.8956 0.0 115.258 High  
cufflinks 13.3231 0.0 45.5024   Low
cufflinks 34.5029 0.0 131.387 High High
cufflinks 11.2829 0.0 38.9163   Low
cufflinks 14.0237 0.0 47.8588    
cufflinks 19.9733 0.0 69.5043 High  
cufflinks 4.225        
cufflinks 14.902     High High
cufflinks 7.354     High  
cufflinks 3.276        
cufflinks 0.782       Low
cufflinks 9.573     High  
cufflinks 3.155        
cufflinks 13.648     High High
cufflinks 7.704     High  
cufflinks 4.565        
cufflinks 3.492        
cufflinks 16.095     High High
cufflinks 4.116        
cufflinks 6.408        
cufflinks 13.845     High High
cufflinks 2.624       Low
cufflinks 13.523     High High

0 Strain