Gene : Glyma.11G071300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31451:SF8 - MANNAN ENDO-1,4-BETA-MANNOSIDASE 3-RELATED Genomic Order:  713
Name:  ? Glyma.11G071300 Secondary Identifier:  ? PAC:30529932
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G071300 0.5kb upstream 0.5kb upstream 3329 true Chr11: 5320650-5323978 Glycine max
Glyma.11G071300 0.5kb upstream 0.5kb upstream 500 false Chr11: 5320650-5321149 Glycine max
Glyma.11G071300 0.5kb downstream 0.5kb downstream 3329 true Chr11: 5321150-5324478 Glycine max
Glyma.11G071300 0.5kb downstream 0.5kb downstream 500 false Chr11: 5323979-5324478 Glycine max
Glyma.11G071300 1.0kb upstream 1.0kb upstream 3829 true Chr11: 5320150-5323978 Glycine max
Glyma.11G071300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5320150-5321149 Glycine max
Glyma.11G071300 1.0kb downstream 1.0kb downstream 3829 true Chr11: 5321150-5324978 Glycine max
Glyma.11G071300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5323979-5324978 Glycine max
Glyma.11G071300 2.0kb upstream 2.0kb upstream 4829 true Chr11: 5319150-5323978 Glycine max
Glyma.11G071300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5319150-5321149 Glycine max
Glyma.11G071300 2.0kb downstream 2.0kb downstream 4829 true Chr11: 5321150-5325978 Glycine max
Glyma.11G071300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5323979-5325978 Glycine max
Glyma.11G071300 5.0kb upstream 5.0kb upstream 7829 true Chr11: 5316150-5323978 Glycine max
Glyma.11G071300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5316150-5321149 Glycine max
Glyma.11G071300 5.0kb downstream 5.0kb downstream 7829 true Chr11: 5321150-5328978 Glycine max
Glyma.11G071300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5323979-5328978 Glycine max
Glyma.11G071300 10.0kb upstream 10.0kb upstream 12829 true Chr11: 5311150-5323978 Glycine max
Glyma.11G071300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5311150-5321149 Glycine max
Glyma.11G071300 10.0kb downstream 10.0kb downstream 12829 true Chr11: 5321150-5333978 Glycine max
Glyma.11G071300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5323979-5333978 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299710 5265 Fabidae View MSA
124070975 5270 Rosid View MSA
123749910 5271 Pentapetalae View MSA
122795720 5272 Eudicot View MSA
122050009 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.15186 0.0 9.62036    
cufflinks 6.17995 0.0 17.3622    
cufflinks 0.88129 0.0 3.12691   Low
cufflinks 4.57393 0.0 13.279    
cufflinks 5.31284 0.0 15.1414    
cufflinks 2.29487 0.0 7.31919    
cufflinks 1.21805 0.0 4.21166   Low
cufflinks 20.7482 0.0 55.4769   High
cufflinks 3.82371 0.0 11.3711    
cufflinks 4.436        
cufflinks 0.069       Low
cufflinks 1.557        
cufflinks 0.65        
cufflinks 0.152       Low
cufflinks 0.101       Low
cufflinks 11.585     High High
cufflinks 1.473        
cufflinks 2.759        
cufflinks 5.772        
cufflinks 12.279     High High
cufflinks 0.463        
cufflinks 17.092     High High
cufflinks 11.263     High High
cufflinks 0.265        
cufflinks 12.953     High High
cufflinks 0.504        

0 Strain