Gene : Glyma.11G065200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31636:SF53 - SCARECROW-LIKE PROTEIN 15 Genomic Order:  652
Name:  ? Glyma.11G065200 Secondary Identifier:  ? PAC:30530423
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G065200 0.5kb upstream 0.5kb upstream 2051 true Chr11: 4929717-4931767 Glycine max
Glyma.11G065200 0.5kb upstream 0.5kb upstream 500 false Chr11: 4931268-4931767 Glycine max
Glyma.11G065200 0.5kb downstream 0.5kb downstream 2051 true Chr11: 4929217-4931267 Glycine max
Glyma.11G065200 0.5kb downstream 0.5kb downstream 500 false Chr11: 4929217-4929716 Glycine max
Glyma.11G065200 1.0kb upstream 1.0kb upstream 2551 true Chr11: 4929717-4932267 Glycine max
Glyma.11G065200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4931268-4932267 Glycine max
Glyma.11G065200 1.0kb downstream 1.0kb downstream 2551 true Chr11: 4928717-4931267 Glycine max
Glyma.11G065200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4928717-4929716 Glycine max
Glyma.11G065200 2.0kb upstream 2.0kb upstream 3551 true Chr11: 4929717-4933267 Glycine max
Glyma.11G065200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4931268-4933267 Glycine max
Glyma.11G065200 2.0kb downstream 2.0kb downstream 3551 true Chr11: 4927717-4931267 Glycine max
Glyma.11G065200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4927717-4929716 Glycine max
Glyma.11G065200 5.0kb upstream 5.0kb upstream 6551 true Chr11: 4929717-4936267 Glycine max
Glyma.11G065200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4931268-4936267 Glycine max
Glyma.11G065200 5.0kb downstream 5.0kb downstream 6551 true Chr11: 4924717-4931267 Glycine max
Glyma.11G065200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4924717-4929716 Glycine max
Glyma.11G065200 10.0kb upstream 10.0kb upstream 11551 true Chr11: 4929717-4941267 Glycine max
Glyma.11G065200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4931268-4941267 Glycine max
Glyma.11G065200 10.0kb downstream 10.0kb downstream 11551 true Chr11: 4919717-4931267 Glycine max
Glyma.11G065200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4919717-4929716 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310795 5265 Fabidae View MSA
124061987 5270 Rosid View MSA
123738804 5271 Pentapetalae View MSA
122792539 5272 Eudicot View MSA
122048418 5273 Angiosperm View MSA
121350524 5274 Embryophyte View MSA
123381771 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.54404 0.0 8.1542   High
cufflinks 0.278796 0.0 1.06379   Low
cufflinks 4.39939 0.0 13.3012   High
cufflinks 0.700986 0.0 2.55807    
cufflinks 1.13859 0.0 3.97868    
cufflinks 0.191985 0.0 0.742771 Low Low
cufflinks 1.19749 0.0 4.17975    
cufflinks 0.95182 0.0 3.39894    
cufflinks 0.621604 0.0 2.27685    
cufflinks 2.261        
cufflinks 4.101        
cufflinks 4.333        
cufflinks 1.959        
cufflinks 0.691        
cufflinks 0.11       Low
cufflinks 0.772        
cufflinks 12.97     High High
cufflinks 4.087        
cufflinks 0.655        
cufflinks 1.277        
cufflinks 3.406        
cufflinks 0.865        
cufflinks 0.514        
cufflinks 2.172        
cufflinks 0.82        
cufflinks 4.306        

0 Strain