Gene : Glyma.11G065700 G. max Wm82.a2.v1
Defline:  (1 of 330) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  657
Name:  ? Glyma.11G065700 Secondary Identifier:  ? PAC:30528476
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G065700 0.5kb upstream 0.5kb upstream 2436 true Chr11: 4952407-4954842 Glycine max
Glyma.11G065700 0.5kb upstream 0.5kb upstream 500 false Chr11: 4954343-4954842 Glycine max
Glyma.11G065700 0.5kb downstream 0.5kb downstream 2436 true Chr11: 4951907-4954342 Glycine max
Glyma.11G065700 0.5kb downstream 0.5kb downstream 500 false Chr11: 4951907-4952406 Glycine max
Glyma.11G065700 1.0kb upstream 1.0kb upstream 2936 true Chr11: 4952407-4955342 Glycine max
Glyma.11G065700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 4954343-4955342 Glycine max
Glyma.11G065700 1.0kb downstream 1.0kb downstream 2936 true Chr11: 4951407-4954342 Glycine max
Glyma.11G065700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 4951407-4952406 Glycine max
Glyma.11G065700 2.0kb upstream 2.0kb upstream 3936 true Chr11: 4952407-4956342 Glycine max
Glyma.11G065700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 4954343-4956342 Glycine max
Glyma.11G065700 2.0kb downstream 2.0kb downstream 3936 true Chr11: 4950407-4954342 Glycine max
Glyma.11G065700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 4950407-4952406 Glycine max
Glyma.11G065700 5.0kb upstream 5.0kb upstream 6936 true Chr11: 4952407-4959342 Glycine max
Glyma.11G065700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 4954343-4959342 Glycine max
Glyma.11G065700 5.0kb downstream 5.0kb downstream 6936 true Chr11: 4947407-4954342 Glycine max
Glyma.11G065700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 4947407-4952406 Glycine max
Glyma.11G065700 10.0kb upstream 10.0kb upstream 11936 true Chr11: 4952407-4964342 Glycine max
Glyma.11G065700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 4954343-4964342 Glycine max
Glyma.11G065700 10.0kb downstream 10.0kb downstream 11936 true Chr11: 4942407-4954342 Glycine max
Glyma.11G065700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 4942407-4952406 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309942 5265 Fabidae View MSA
124062138 5270 Rosid View MSA
123738772 5271 Pentapetalae View MSA
122795104 5272 Eudicot View MSA
122042665 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121309997 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.59163 0.0 22.803    
cufflinks 9.09265 0.0 34.2897   High
cufflinks 2.9243 0.0 15.3303   Low
cufflinks 5.84414 0.0 24.2923    
cufflinks 7.07875 0.0 28.9118    
cufflinks 5.11694 0.0 22.3423    
cufflinks 7.41875 0.0 25.1405    
cufflinks 7.41067 0.0 25.5231    
cufflinks 5.98193 0.0 24.6519    
cufflinks 1.435        
cufflinks 0.257       Low
cufflinks 1.539        
cufflinks 2.36        
cufflinks 2.985       High
cufflinks 0.513       Low
cufflinks 1.898        
cufflinks 0.581        
cufflinks 2.06        
cufflinks 2.538        
cufflinks 2.018        
cufflinks 0.33       Low
cufflinks 2.347        
cufflinks 2.326        
cufflinks 0.372       Low
cufflinks 2.029        
cufflinks 0.559        

0 Strain