Gene : Glyma.11G068600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR17972 - NUCLEOLAR RNA-ASSOCIATED PROTEIN Genomic Order:  686
Name:  ? Glyma.11G068600 Secondary Identifier:  ? PAC:30531417
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G068600 0.5kb upstream 0.5kb upstream 8618 true Chr11: 5145218-5153835 Glycine max
Glyma.11G068600 0.5kb upstream 0.5kb upstream 500 false Chr11: 5153336-5153835 Glycine max
Glyma.11G068600 0.5kb downstream 0.5kb downstream 8618 true Chr11: 5144718-5153335 Glycine max
Glyma.11G068600 0.5kb downstream 0.5kb downstream 500 false Chr11: 5144718-5145217 Glycine max
Glyma.11G068600 1.0kb upstream 1.0kb upstream 9118 true Chr11: 5145218-5154335 Glycine max
Glyma.11G068600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 5153336-5154335 Glycine max
Glyma.11G068600 1.0kb downstream 1.0kb downstream 9118 true Chr11: 5144218-5153335 Glycine max
Glyma.11G068600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 5144218-5145217 Glycine max
Glyma.11G068600 2.0kb upstream 2.0kb upstream 10118 true Chr11: 5145218-5155335 Glycine max
Glyma.11G068600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 5153336-5155335 Glycine max
Glyma.11G068600 2.0kb downstream 2.0kb downstream 10118 true Chr11: 5143218-5153335 Glycine max
Glyma.11G068600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 5143218-5145217 Glycine max
Glyma.11G068600 5.0kb upstream 5.0kb upstream 13118 true Chr11: 5145218-5158335 Glycine max
Glyma.11G068600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 5153336-5158335 Glycine max
Glyma.11G068600 5.0kb downstream 5.0kb downstream 13118 true Chr11: 5140218-5153335 Glycine max
Glyma.11G068600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 5140218-5145217 Glycine max
Glyma.11G068600 10.0kb upstream 10.0kb upstream 18118 true Chr11: 5145218-5163335 Glycine max
Glyma.11G068600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 5153336-5163335 Glycine max
Glyma.11G068600 10.0kb downstream 10.0kb downstream 18118 true Chr11: 5135218-5153335 Glycine max
Glyma.11G068600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 5135218-5145217 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303331 5265 Fabidae View MSA
124066124 5270 Rosid View MSA
123740868 5271 Pentapetalae View MSA
122787151 5272 Eudicot View MSA
122046493 5273 Angiosperm View MSA
121346121 5274 Embryophyte View MSA
123425222 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.18835 0.0 15.1529    
cufflinks 3.28381 0.0 12.3312    
cufflinks 2.69428 0.0 9.08872    
cufflinks 3.24563 0.0 12.2938    
cufflinks 4.98294 0.0 19.6076   High
cufflinks 1.63463 0.0 4.98122   Low
cufflinks 3.94628 0.0 18.843    
cufflinks 2.59348 0.0 10.3431    
cufflinks 4.59154 0.0 16.2977    
cufflinks 0.378        
cufflinks 0.065       Low
cufflinks 1.05       High
cufflinks 1.229       High
cufflinks 1.788       High
cufflinks 0.212        
cufflinks 0.328        
cufflinks 0.344        
cufflinks 0.9        
cufflinks 0.883        
cufflinks 0.128        
cufflinks 0.101       Low
cufflinks 0.227        
cufflinks 0.551        
cufflinks 0.067       Low
cufflinks 0.253        
cufflinks 0.228        

0 Strain