Gene : Glyma.11G105100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31490:SF2 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  1051
Name:  ? Glyma.11G105100 Secondary Identifier:  ? PAC:30531050
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G105100 0.5kb upstream 0.5kb upstream 3929 true Chr11: 7977555-7981483 Glycine max
Glyma.11G105100 0.5kb upstream 0.5kb upstream 500 false Chr11: 7980984-7981483 Glycine max
Glyma.11G105100 0.5kb downstream 0.5kb downstream 3929 true Chr11: 7977055-7980983 Glycine max
Glyma.11G105100 0.5kb downstream 0.5kb downstream 500 false Chr11: 7977055-7977554 Glycine max
Glyma.11G105100 1.0kb upstream 1.0kb upstream 4429 true Chr11: 7977555-7981983 Glycine max
Glyma.11G105100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7980984-7981983 Glycine max
Glyma.11G105100 1.0kb downstream 1.0kb downstream 4429 true Chr11: 7976555-7980983 Glycine max
Glyma.11G105100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7976555-7977554 Glycine max
Glyma.11G105100 2.0kb upstream 2.0kb upstream 5429 true Chr11: 7977555-7982983 Glycine max
Glyma.11G105100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7980984-7982983 Glycine max
Glyma.11G105100 2.0kb downstream 2.0kb downstream 5429 true Chr11: 7975555-7980983 Glycine max
Glyma.11G105100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7975555-7977554 Glycine max
Glyma.11G105100 5.0kb upstream 5.0kb upstream 8429 true Chr11: 7977555-7985983 Glycine max
Glyma.11G105100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7980984-7985983 Glycine max
Glyma.11G105100 5.0kb downstream 5.0kb downstream 8429 true Chr11: 7972555-7980983 Glycine max
Glyma.11G105100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7972555-7977554 Glycine max
Glyma.11G105100 10.0kb upstream 10.0kb upstream 13429 true Chr11: 7977555-7990983 Glycine max
Glyma.11G105100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7980984-7990983 Glycine max
Glyma.11G105100 10.0kb downstream 10.0kb downstream 13429 true Chr11: 7967555-7980983 Glycine max
Glyma.11G105100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7967555-7977554 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314649 5265 Fabidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.284067 0.0 1.08032    
cufflinks 0.477771 0.0 1.77445    
cufflinks 0.507984 0.0 1.87614    
cufflinks 5.75491 0.0 16.4548   High
cufflinks 0.295715 0.0 1.12265    
cufflinks 0.167702 0.0 0.65246 Low Low
cufflinks 4.32006 0.0 12.8337   High
cufflinks 0.253418 0.0 0.968113    
cufflinks 0.474113 0.0 1.76072    
cufflinks 0.248        
cufflinks 0.401        
cufflinks 0.349        
cufflinks 0.389        
cufflinks 0.415        
cufflinks 0.351        
cufflinks 0.795       High
cufflinks 0.134       Low
cufflinks 0.204       Low
cufflinks 0.927       High
cufflinks 0.788        
cufflinks 0.223       Low
cufflinks 0.89       High
cufflinks 1.022       High
cufflinks 0.432        
cufflinks 0.776        
cufflinks 0.301        

0 Strain