Gene : Glyma.11G105200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31490:SF2 - GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  1052
Name:  ? Glyma.11G105200 Secondary Identifier:  ? PAC:30528475
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G105200 0.5kb upstream 0.5kb upstream 3211 true Chr11: 7985751-7988961 Glycine max
Glyma.11G105200 0.5kb upstream 0.5kb upstream 500 false Chr11: 7988462-7988961 Glycine max
Glyma.11G105200 0.5kb downstream 0.5kb downstream 3211 true Chr11: 7985251-7988461 Glycine max
Glyma.11G105200 0.5kb downstream 0.5kb downstream 500 false Chr11: 7985251-7985750 Glycine max
Glyma.11G105200 1.0kb upstream 1.0kb upstream 3711 true Chr11: 7985751-7989461 Glycine max
Glyma.11G105200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7988462-7989461 Glycine max
Glyma.11G105200 1.0kb downstream 1.0kb downstream 3711 true Chr11: 7984751-7988461 Glycine max
Glyma.11G105200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7984751-7985750 Glycine max
Glyma.11G105200 2.0kb upstream 2.0kb upstream 4711 true Chr11: 7985751-7990461 Glycine max
Glyma.11G105200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7988462-7990461 Glycine max
Glyma.11G105200 2.0kb downstream 2.0kb downstream 4711 true Chr11: 7983751-7988461 Glycine max
Glyma.11G105200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7983751-7985750 Glycine max
Glyma.11G105200 5.0kb upstream 5.0kb upstream 7711 true Chr11: 7985751-7993461 Glycine max
Glyma.11G105200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7988462-7993461 Glycine max
Glyma.11G105200 5.0kb downstream 5.0kb downstream 7711 true Chr11: 7980751-7988461 Glycine max
Glyma.11G105200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7980751-7985750 Glycine max
Glyma.11G105200 10.0kb upstream 10.0kb upstream 12711 true Chr11: 7985751-7998461 Glycine max
Glyma.11G105200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7988462-7998461 Glycine max
Glyma.11G105200 10.0kb downstream 10.0kb downstream 12711 true Chr11: 7975751-7988461 Glycine max
Glyma.11G105200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7975751-7985750 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314649 5265 Fabidae View MSA
124074050 5270 Rosid View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.114029 0.0 0.448608 Low  
cufflinks 0.0787629 0.0 0.313563 Low  
cufflinks 0.0188895 0.0 0.0818124 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.113389 0.0 0.44623 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0233573 0.0 0.0995453 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.035     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094     Low High
cufflinks 0.011     Low Low
cufflinks 0.047     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.045     Low  
cufflinks 0.039     Low  
cufflinks 0.007     Low Low
cufflinks 0.039     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain