Gene : Glyma.11G106500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12385:SF44 - PLASMA-MEMBRANE CHOLINE TRANSPORTER FAMILY PROTEIN Genomic Order:  1065
Name:  ? Glyma.11G106500 Secondary Identifier:  ? PAC:30529917
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G106500 0.5kb upstream 0.5kb upstream 4888 true Chr11: 8115240-8120127 Glycine max
Glyma.11G106500 0.5kb upstream 0.5kb upstream 500 false Chr11: 8115240-8115739 Glycine max
Glyma.11G106500 0.5kb downstream 0.5kb downstream 4888 true Chr11: 8115740-8120627 Glycine max
Glyma.11G106500 0.5kb downstream 0.5kb downstream 500 false Chr11: 8120128-8120627 Glycine max
Glyma.11G106500 1.0kb upstream 1.0kb upstream 5388 true Chr11: 8114740-8120127 Glycine max
Glyma.11G106500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8114740-8115739 Glycine max
Glyma.11G106500 1.0kb downstream 1.0kb downstream 5388 true Chr11: 8115740-8121127 Glycine max
Glyma.11G106500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8120128-8121127 Glycine max
Glyma.11G106500 2.0kb upstream 2.0kb upstream 6388 true Chr11: 8113740-8120127 Glycine max
Glyma.11G106500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8113740-8115739 Glycine max
Glyma.11G106500 2.0kb downstream 2.0kb downstream 6388 true Chr11: 8115740-8122127 Glycine max
Glyma.11G106500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8120128-8122127 Glycine max
Glyma.11G106500 5.0kb upstream 5.0kb upstream 9388 true Chr11: 8110740-8120127 Glycine max
Glyma.11G106500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8110740-8115739 Glycine max
Glyma.11G106500 5.0kb downstream 5.0kb downstream 9388 true Chr11: 8115740-8125127 Glycine max
Glyma.11G106500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8120128-8125127 Glycine max
Glyma.11G106500 10.0kb upstream 10.0kb upstream 14388 true Chr11: 8105740-8120127 Glycine max
Glyma.11G106500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8105740-8115739 Glycine max
Glyma.11G106500 10.0kb downstream 10.0kb downstream 14388 true Chr11: 8115740-8130127 Glycine max
Glyma.11G106500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8120128-8130127 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302050 5265 Fabidae View MSA
124063847 5270 Rosid View MSA
123737171 5271 Pentapetalae View MSA
122792256 5272 Eudicot View MSA
122043593 5273 Angiosperm View MSA
121347298 5274 Embryophyte View MSA
123428325 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.07012 0.0 22.1239    
cufflinks 6.6479 0.0 18.5117   Low
cufflinks 7.6043 0.0 20.9146    
cufflinks 10.5135 0.0 28.3606   High
cufflinks 9.99144 0.0 27.0104    
cufflinks 10.532 0.0 28.378   High
cufflinks 8.04846 0.0 22.0665    
cufflinks 8.91339 0.0 24.2546    
cufflinks 7.05504 0.0 19.5172   Low
cufflinks 4.289        
cufflinks 4.723       High
cufflinks 3.368        
cufflinks 3.291        
cufflinks 4.018        
cufflinks 2.196       Low
cufflinks 3.807        
cufflinks 4.454        
cufflinks 3.538        
cufflinks 2.975       Low
cufflinks 3.771        
cufflinks 4.406        
cufflinks 3.458        
cufflinks 3.108        
cufflinks 3.89        
cufflinks 3.719        
cufflinks 4.857       High

0 Strain