Gene : Glyma.11G101600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23074:SF95 - AAA-TYPE ATPASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  1016
Name:  ? Glyma.11G101600 Secondary Identifier:  ? PAC:30528643
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G101600 0.5kb upstream 0.5kb upstream 19070 true Chr11: 7679551-7698620 Glycine max
Glyma.11G101600 0.5kb upstream 0.5kb upstream 500 false Chr11: 7679551-7680050 Glycine max
Glyma.11G101600 0.5kb downstream 0.5kb downstream 19070 true Chr11: 7680051-7699120 Glycine max
Glyma.11G101600 0.5kb downstream 0.5kb downstream 500 false Chr11: 7698621-7699120 Glycine max
Glyma.11G101600 1.0kb upstream 1.0kb upstream 19570 true Chr11: 7679051-7698620 Glycine max
Glyma.11G101600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 7679051-7680050 Glycine max
Glyma.11G101600 1.0kb downstream 1.0kb downstream 19570 true Chr11: 7680051-7699620 Glycine max
Glyma.11G101600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 7698621-7699620 Glycine max
Glyma.11G101600 2.0kb upstream 2.0kb upstream 20570 true Chr11: 7678051-7698620 Glycine max
Glyma.11G101600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 7678051-7680050 Glycine max
Glyma.11G101600 2.0kb downstream 2.0kb downstream 20570 true Chr11: 7680051-7700620 Glycine max
Glyma.11G101600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 7698621-7700620 Glycine max
Glyma.11G101600 5.0kb upstream 5.0kb upstream 23570 true Chr11: 7675051-7698620 Glycine max
Glyma.11G101600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 7675051-7680050 Glycine max
Glyma.11G101600 5.0kb downstream 5.0kb downstream 23570 true Chr11: 7680051-7703620 Glycine max
Glyma.11G101600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 7698621-7703620 Glycine max
Glyma.11G101600 10.0kb upstream 10.0kb upstream 28570 true Chr11: 7670051-7698620 Glycine max
Glyma.11G101600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 7670051-7680050 Glycine max
Glyma.11G101600 10.0kb downstream 10.0kb downstream 28570 true Chr11: 7680051-7708620 Glycine max
Glyma.11G101600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 7698621-7708620 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305383 5265 Fabidae View MSA
124068786 5270 Rosid View MSA
123736578 5271 Pentapetalae View MSA
122786690 5272 Eudicot View MSA
122044741 5273 Angiosperm View MSA
121348057 5274 Embryophyte View MSA
123380716 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.3106 0.0 39.0583    
cufflinks 8.10778 0.0 27.6206    
cufflinks 7.22421 0.0 24.6225    
cufflinks 6.75826 0.0 23.093   Low
cufflinks 14.8685 0.0 52.8875   High
cufflinks 8.83214 0.0 30.1055    
cufflinks 10.9848 0.0 37.7893    
cufflinks 8.61624 0.0 29.3666    
cufflinks 8.47571 0.0 28.8759    
cufflinks 1.005        
cufflinks 0.953        
cufflinks 0.951        
cufflinks 2.385       High
cufflinks 3.144       High
cufflinks 0.92        
cufflinks 1.34        
cufflinks 0.951        
cufflinks 1.309        
cufflinks 1.183        
cufflinks 1.284        
cufflinks 0.887        
cufflinks 1.38        
cufflinks 1.494        
cufflinks 0.961        
cufflinks 1.326        
cufflinks 0.913        

0 Strain