Gene : Glyma.11G132700 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR14155:SF75 - E3 UBIQUITIN LIGASE BIG BROTHER Genomic Order:  1327
Name:  ? Glyma.11G132700 Secondary Identifier:  ? PAC:30531612
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Ontology Annotation Displayer

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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G132700 0.5kb upstream 0.5kb upstream 5609 true Chr11: 10159957-10165565 Glycine max
Glyma.11G132700 0.5kb upstream 0.5kb upstream 500 false Chr11: 10159957-10160456 Glycine max
Glyma.11G132700 0.5kb downstream 0.5kb downstream 5609 true Chr11: 10160457-10166065 Glycine max
Glyma.11G132700 0.5kb downstream 0.5kb downstream 500 false Chr11: 10165566-10166065 Glycine max
Glyma.11G132700 1.0kb upstream 1.0kb upstream 6109 true Chr11: 10159457-10165565 Glycine max
Glyma.11G132700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10159457-10160456 Glycine max
Glyma.11G132700 1.0kb downstream 1.0kb downstream 6109 true Chr11: 10160457-10166565 Glycine max
Glyma.11G132700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10165566-10166565 Glycine max
Glyma.11G132700 2.0kb upstream 2.0kb upstream 7109 true Chr11: 10158457-10165565 Glycine max
Glyma.11G132700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10158457-10160456 Glycine max
Glyma.11G132700 2.0kb downstream 2.0kb downstream 7109 true Chr11: 10160457-10167565 Glycine max
Glyma.11G132700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10165566-10167565 Glycine max
Glyma.11G132700 5.0kb upstream 5.0kb upstream 10109 true Chr11: 10155457-10165565 Glycine max
Glyma.11G132700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10155457-10160456 Glycine max
Glyma.11G132700 5.0kb downstream 5.0kb downstream 10109 true Chr11: 10160457-10170565 Glycine max
Glyma.11G132700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10165566-10170565 Glycine max
Glyma.11G132700 10.0kb upstream 10.0kb upstream 15109 true Chr11: 10150457-10165565 Glycine max
Glyma.11G132700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10150457-10160456 Glycine max
Glyma.11G132700 10.0kb downstream 10.0kb downstream 15109 true Chr11: 10160457-10175565 Glycine max
Glyma.11G132700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10165566-10175565 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302480 5265 Fabidae View MSA
124069902 5270 Rosid View MSA
123752046 5271 Pentapetalae View MSA
122792578 5272 Eudicot View MSA
122048358 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121310941 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.14068 0.0 16.5498   Low
cufflinks 19.9076 0.0 72.2996    
cufflinks 8.0636 0.0 32.5487   Low
cufflinks 24.0562 0.0 85.344 High  
cufflinks 21.7228 0.0 77.0853 High  
cufflinks 22.2289 0.0 70.2852    
cufflinks 22.5719 0.0 82.8367 High  
cufflinks 21.4659 0.0 76.1764 High  
cufflinks 12.8658 0.0 47.1268    
cufflinks 2.852       High
cufflinks 0.29       Low
cufflinks 1.243        
cufflinks 2.966       High
cufflinks 4.155       High
cufflinks 0.442       Low
cufflinks 1.09        
cufflinks 0.887        
cufflinks 2.538       High
cufflinks 2.551       High
cufflinks 1.172        
cufflinks 0.542        
cufflinks 0.989        
cufflinks 0.917        
cufflinks 0.481       Low
cufflinks 1.072        
cufflinks 0.72        

0 Strain