Gene : Glyma.11G126800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12136//PTHR12136:SF61 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  1268
Name:  ? Glyma.11G126800 Secondary Identifier:  ? PAC:30531404
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G126800 0.5kb upstream 0.5kb upstream 2423 true Chr11: 9646947-9649369 Glycine max
Glyma.11G126800 0.5kb upstream 0.5kb upstream 500 false Chr11: 9646947-9647446 Glycine max
Glyma.11G126800 0.5kb downstream 0.5kb downstream 2423 true Chr11: 9647447-9649869 Glycine max
Glyma.11G126800 0.5kb downstream 0.5kb downstream 500 false Chr11: 9649370-9649869 Glycine max
Glyma.11G126800 1.0kb upstream 1.0kb upstream 2923 true Chr11: 9646447-9649369 Glycine max
Glyma.11G126800 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9646447-9647446 Glycine max
Glyma.11G126800 1.0kb downstream 1.0kb downstream 2923 true Chr11: 9647447-9650369 Glycine max
Glyma.11G126800 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9649370-9650369 Glycine max
Glyma.11G126800 2.0kb upstream 2.0kb upstream 3923 true Chr11: 9645447-9649369 Glycine max
Glyma.11G126800 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9645447-9647446 Glycine max
Glyma.11G126800 2.0kb downstream 2.0kb downstream 3923 true Chr11: 9647447-9651369 Glycine max
Glyma.11G126800 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9649370-9651369 Glycine max
Glyma.11G126800 5.0kb upstream 5.0kb upstream 6923 true Chr11: 9642447-9649369 Glycine max
Glyma.11G126800 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9642447-9647446 Glycine max
Glyma.11G126800 5.0kb downstream 5.0kb downstream 6923 true Chr11: 9647447-9654369 Glycine max
Glyma.11G126800 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9649370-9654369 Glycine max
Glyma.11G126800 10.0kb upstream 10.0kb upstream 11923 true Chr11: 9637447-9649369 Glycine max
Glyma.11G126800 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9637447-9647446 Glycine max
Glyma.11G126800 10.0kb downstream 10.0kb downstream 11923 true Chr11: 9647447-9659369 Glycine max
Glyma.11G126800 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9649370-9659369 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301346 5265 Fabidae View MSA
124065354 5270 Rosid View MSA
123745127 5271 Pentapetalae View MSA
122790328 5272 Eudicot View MSA
122048003 5273 Angiosperm View MSA
121346001 5274 Embryophyte View MSA
123380307 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0859224 0.0 0.350032 Low  
cufflinks 0.286878 0.0 1.11422   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0903216 0.0 0.366472 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.119501 0.0 0.479729 Low  
cufflinks 0.0947671 0.0 0.384415 Low  
cufflinks 0.165173 0.0 0.654509 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.771       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.025     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low Low
cufflinks 0.03     Low  
cufflinks 0.119        
cufflinks 0.015     Low  
cufflinks 0.136        
cufflinks 0.305       High
cufflinks 0.068     Low  
cufflinks 0.013     Low  
cufflinks 0.029     Low  
cufflinks 0.058     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.057     Low  
cufflinks 0.017     Low  

0 Strain