Gene : Glyma.11G119700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12300//PTHR12300:SF60 - HVA22-LIKE PROTEINS Genomic Order:  1197
Name:  ? Glyma.11G119700 Secondary Identifier:  ? PAC:30531627
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G119700 0.5kb upstream 0.5kb upstream 3624 true Chr11: 9134298-9137921 Glycine max
Glyma.11G119700 0.5kb upstream 0.5kb upstream 500 false Chr11: 9134298-9134797 Glycine max
Glyma.11G119700 0.5kb downstream 0.5kb downstream 3624 true Chr11: 9134798-9138421 Glycine max
Glyma.11G119700 0.5kb downstream 0.5kb downstream 500 false Chr11: 9137922-9138421 Glycine max
Glyma.11G119700 1.0kb upstream 1.0kb upstream 4124 true Chr11: 9133798-9137921 Glycine max
Glyma.11G119700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 9133798-9134797 Glycine max
Glyma.11G119700 1.0kb downstream 1.0kb downstream 4124 true Chr11: 9134798-9138921 Glycine max
Glyma.11G119700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 9137922-9138921 Glycine max
Glyma.11G119700 2.0kb upstream 2.0kb upstream 5124 true Chr11: 9132798-9137921 Glycine max
Glyma.11G119700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 9132798-9134797 Glycine max
Glyma.11G119700 2.0kb downstream 2.0kb downstream 5124 true Chr11: 9134798-9139921 Glycine max
Glyma.11G119700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 9137922-9139921 Glycine max
Glyma.11G119700 5.0kb upstream 5.0kb upstream 8124 true Chr11: 9129798-9137921 Glycine max
Glyma.11G119700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 9129798-9134797 Glycine max
Glyma.11G119700 5.0kb downstream 5.0kb downstream 8124 true Chr11: 9134798-9142921 Glycine max
Glyma.11G119700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 9137922-9142921 Glycine max
Glyma.11G119700 10.0kb upstream 10.0kb upstream 13124 true Chr11: 9124798-9137921 Glycine max
Glyma.11G119700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 9124798-9134797 Glycine max
Glyma.11G119700 10.0kb downstream 10.0kb downstream 13124 true Chr11: 9134798-9147921 Glycine max
Glyma.11G119700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 9137922-9147921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122255049 5265 Fabidae View MSA
124070048 5270 Rosid View MSA
123739293 5271 Pentapetalae View MSA
122793749 5272 Eudicot View MSA
122049785 5273 Angiosperm View MSA
121348295 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.02539 0.0 13.2148    
cufflinks 3.4595 0.0 11.5337    
cufflinks 5.7823 0.0 17.861   High
cufflinks 4.48057 0.0 14.4476    
cufflinks 2.04108 0.0 7.21287   Low
cufflinks 3.60238 0.0 11.9854    
cufflinks 2.54813 0.0 8.8387    
cufflinks 3.87797 0.0 12.7436    
cufflinks 2.28863 0.0 7.98549   Low
cufflinks 0.618        
cufflinks 0.807        
cufflinks 1.579       High
cufflinks 0.502        
cufflinks 0.99        
cufflinks 0.429       Low
cufflinks 0.679        
cufflinks 0.376       Low
cufflinks 1.697       High
cufflinks 1.329       High
cufflinks 0.632        
cufflinks 0.686        
cufflinks 0.695        
cufflinks 0.812        
cufflinks 0.748        
cufflinks 0.6        
cufflinks 0.549        

0 Strain