Gene : Glyma.11G114700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR33180:SF4 - PHOTOSYSTEM II CP43 CHLOROPHYLL APOPROTEIN Genomic Order:  1147
Name:  ? Glyma.11G114700 Secondary Identifier:  ? PAC:30531078
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G114700 0.5kb upstream 0.5kb upstream 1869 true Chr11: 8753784-8755652 Glycine max
Glyma.11G114700 0.5kb upstream 0.5kb upstream 500 false Chr11: 8755153-8755652 Glycine max
Glyma.11G114700 0.5kb downstream 0.5kb downstream 1869 true Chr11: 8753284-8755152 Glycine max
Glyma.11G114700 0.5kb downstream 0.5kb downstream 500 false Chr11: 8753284-8753783 Glycine max
Glyma.11G114700 1.0kb upstream 1.0kb upstream 2369 true Chr11: 8753784-8756152 Glycine max
Glyma.11G114700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 8755153-8756152 Glycine max
Glyma.11G114700 1.0kb downstream 1.0kb downstream 2369 true Chr11: 8752784-8755152 Glycine max
Glyma.11G114700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 8752784-8753783 Glycine max
Glyma.11G114700 2.0kb upstream 2.0kb upstream 3369 true Chr11: 8753784-8757152 Glycine max
Glyma.11G114700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 8755153-8757152 Glycine max
Glyma.11G114700 2.0kb downstream 2.0kb downstream 3369 true Chr11: 8751784-8755152 Glycine max
Glyma.11G114700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 8751784-8753783 Glycine max
Glyma.11G114700 5.0kb upstream 5.0kb upstream 6369 true Chr11: 8753784-8760152 Glycine max
Glyma.11G114700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 8755153-8760152 Glycine max
Glyma.11G114700 5.0kb downstream 5.0kb downstream 6369 true Chr11: 8748784-8755152 Glycine max
Glyma.11G114700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 8748784-8753783 Glycine max
Glyma.11G114700 10.0kb upstream 10.0kb upstream 11369 true Chr11: 8753784-8765152 Glycine max
Glyma.11G114700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 8755153-8765152 Glycine max
Glyma.11G114700 10.0kb downstream 10.0kb downstream 11369 true Chr11: 8743784-8755152 Glycine max
Glyma.11G114700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 8743784-8753783 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122246659 5265 Fabidae Singleton cluster - no MSA
124039438 5270 Rosid View MSA
123752529 5271 Pentapetalae View MSA
122774617 5272 Eudicot View MSA
122048462 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121310978 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.0731 0.0 89.3466 High High
cufflinks 8.90744 0.0 31.0432    
cufflinks 4.01534 0.0 14.7715    
cufflinks 64.3479 0.0 176.033 High High
cufflinks 2.33943 0.0 8.81497    
cufflinks 0.655349 0.0 2.60273   Low
cufflinks 21.7439 0.0 67.6105    
cufflinks 5.35994 0.0 19.3787    
cufflinks 0.626332 0.0 2.49318   Low
cufflinks 2.813        
cufflinks 0.013     Low Low
cufflinks 1.368        
cufflinks 0.071     Low  
cufflinks 0.103        
cufflinks 0.053        
cufflinks 5.193       High
cufflinks 0.166        
cufflinks 1.191        
cufflinks 2.29        
cufflinks 5.762       High
cufflinks 0.049     Low Low
cufflinks 5.602       High
cufflinks 7.592     High High
cufflinks 0.029     Low Low
cufflinks 5.431       High
cufflinks 0.051     Low  

0 Strain