Gene : Glyma.11G166500 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR22950:SF280 - TRANSMEMBRANE AMINO ACID TRANSPORTER FAMILY PROTEIN Genomic Order:  1665
Name:  ? Glyma.11G166500 Secondary Identifier:  ? PAC:30530768
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G166500 0.5kb upstream 0.5kb upstream 4457 true Chr11: 16167780-16172236 Glycine max
Glyma.11G166500 0.5kb upstream 0.5kb upstream 500 false Chr11: 16167780-16168279 Glycine max
Glyma.11G166500 0.5kb downstream 0.5kb downstream 4457 true Chr11: 16168280-16172736 Glycine max
Glyma.11G166500 0.5kb downstream 0.5kb downstream 500 false Chr11: 16172237-16172736 Glycine max
Glyma.11G166500 1.0kb upstream 1.0kb upstream 4957 true Chr11: 16167280-16172236 Glycine max
Glyma.11G166500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 16167280-16168279 Glycine max
Glyma.11G166500 1.0kb downstream 1.0kb downstream 4957 true Chr11: 16168280-16173236 Glycine max
Glyma.11G166500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 16172237-16173236 Glycine max
Glyma.11G166500 2.0kb upstream 2.0kb upstream 5957 true Chr11: 16166280-16172236 Glycine max
Glyma.11G166500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 16166280-16168279 Glycine max
Glyma.11G166500 2.0kb downstream 2.0kb downstream 5957 true Chr11: 16168280-16174236 Glycine max
Glyma.11G166500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 16172237-16174236 Glycine max
Glyma.11G166500 5.0kb upstream 5.0kb upstream 8957 true Chr11: 16163280-16172236 Glycine max
Glyma.11G166500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 16163280-16168279 Glycine max
Glyma.11G166500 5.0kb downstream 5.0kb downstream 8957 true Chr11: 16168280-16177236 Glycine max
Glyma.11G166500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 16172237-16177236 Glycine max
Glyma.11G166500 10.0kb upstream 10.0kb upstream 13957 true Chr11: 16158280-16172236 Glycine max
Glyma.11G166500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 16158280-16168279 Glycine max
Glyma.11G166500 10.0kb downstream 10.0kb downstream 13957 true Chr11: 16168280-16182236 Glycine max
Glyma.11G166500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 16172237-16182236 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122030722 5273 Angiosperm View MSA
122316587 5265 Fabidae View MSA
124075194 5270 Rosid View MSA
123754195 5271 Pentapetalae View MSA
122775591 5272 Eudicot View MSA
121299863 5274 Embryophyte View MSA
123337692 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.383 0.0 15.319    
cufflinks 7.82591 0.0 28.3303    
cufflinks 64.4934 0.0 275.772 High High
cufflinks 3.46228 0.0 16.5959    
cufflinks 1.12528 0.0 6.46124    
cufflinks 1.57937 0.0 9.11551    
cufflinks 31.1738 0.0 119.762 High High
cufflinks 0.719798 0.0 3.32731   Low
cufflinks 1.56731 0.0 8.91285    
cufflinks 0.156        
cufflinks 0.012     Low Low
cufflinks 6.964       High
cufflinks 0.32        
cufflinks 0.391        
cufflinks 0.025     Low Low
cufflinks 1.105        
cufflinks 0.025     Low Low
cufflinks 0.422        
cufflinks 1.233        
cufflinks 0.917        
cufflinks 0.006     Low Low
cufflinks 1.134        
cufflinks 1.225        
cufflinks 0.021     Low Low
cufflinks 1.565        
cufflinks 0.023     Low Low

0 Strain