Gene : Glyma.11G169300 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11040:SF26 - ZINC TRANSPORTER 6, CHLOROPLASTIC Genomic Order:  1693
Name:  ? Glyma.11G169300 Secondary Identifier:  ? PAC:30528101
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G169300 0.5kb upstream 0.5kb upstream 3259 true Chr11: 17933430-17936688 Glycine max
Glyma.11G169300 0.5kb upstream 0.5kb upstream 500 false Chr11: 17933430-17933929 Glycine max
Glyma.11G169300 0.5kb downstream 0.5kb downstream 3259 true Chr11: 17933930-17937188 Glycine max
Glyma.11G169300 0.5kb downstream 0.5kb downstream 500 false Chr11: 17936689-17937188 Glycine max
Glyma.11G169300 1.0kb upstream 1.0kb upstream 3759 true Chr11: 17932930-17936688 Glycine max
Glyma.11G169300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 17932930-17933929 Glycine max
Glyma.11G169300 1.0kb downstream 1.0kb downstream 3759 true Chr11: 17933930-17937688 Glycine max
Glyma.11G169300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 17936689-17937688 Glycine max
Glyma.11G169300 2.0kb upstream 2.0kb upstream 4759 true Chr11: 17931930-17936688 Glycine max
Glyma.11G169300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 17931930-17933929 Glycine max
Glyma.11G169300 2.0kb downstream 2.0kb downstream 4759 true Chr11: 17933930-17938688 Glycine max
Glyma.11G169300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 17936689-17938688 Glycine max
Glyma.11G169300 5.0kb upstream 5.0kb upstream 7759 true Chr11: 17928930-17936688 Glycine max
Glyma.11G169300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 17928930-17933929 Glycine max
Glyma.11G169300 5.0kb downstream 5.0kb downstream 7759 true Chr11: 17933930-17941688 Glycine max
Glyma.11G169300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 17936689-17941688 Glycine max
Glyma.11G169300 10.0kb upstream 10.0kb upstream 12759 true Chr11: 17923930-17936688 Glycine max
Glyma.11G169300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 17923930-17933929 Glycine max
Glyma.11G169300 10.0kb downstream 10.0kb downstream 12759 true Chr11: 17933930-17946688 Glycine max
Glyma.11G169300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 17936689-17946688 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311718 5265 Fabidae View MSA
124065982 5270 Rosid View MSA
123741321 5271 Pentapetalae View MSA
122790918 5272 Eudicot View MSA
122046721 5273 Angiosperm View MSA
121310647 5274 Embryophyte View MSA
123428132 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41316 0.0 27.7295    
cufflinks 1.72492 0.0 12.2182   Low
cufflinks 7.6484 0.0 33.9021    
cufflinks 4.73372 0.0 24.0594    
cufflinks 7.92645 0.0 34.347    
cufflinks 0.999544 0.0 8.15135   Low
cufflinks 14.7488 0.0 59.4213   High
cufflinks 10.9333 0.0 42.6993    
cufflinks 12.3292 0.0 51.9972    
cufflinks 0.833        
cufflinks 1.166        
cufflinks 0.793        
cufflinks 0.526        
cufflinks 0.145       Low
cufflinks 0.842        
cufflinks 0.508        
cufflinks 0.532        
cufflinks 0.394        
cufflinks 0.253       Low
cufflinks 0.728        
cufflinks 1.417       High
cufflinks 0.625        
cufflinks 0.253       Low
cufflinks 2.12       High
cufflinks 0.781        
cufflinks 0.518        

0 Strain