Gene : Glyma.11G149200 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11 Genomic Order:  1492
Name:  ? Glyma.11G149200 Secondary Identifier:  ? PAC:30531485
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G149200 0.5kb upstream 0.5kb upstream 3846 true Chr11: 11611414-11615259 Glycine max
Glyma.11G149200 0.5kb upstream 0.5kb upstream 500 false Chr11: 11614760-11615259 Glycine max
Glyma.11G149200 0.5kb downstream 0.5kb downstream 3846 true Chr11: 11610914-11614759 Glycine max
Glyma.11G149200 0.5kb downstream 0.5kb downstream 500 false Chr11: 11610914-11611413 Glycine max
Glyma.11G149200 1.0kb upstream 1.0kb upstream 4346 true Chr11: 11611414-11615759 Glycine max
Glyma.11G149200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11614760-11615759 Glycine max
Glyma.11G149200 1.0kb downstream 1.0kb downstream 4346 true Chr11: 11610414-11614759 Glycine max
Glyma.11G149200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11610414-11611413 Glycine max
Glyma.11G149200 2.0kb upstream 2.0kb upstream 5346 true Chr11: 11611414-11616759 Glycine max
Glyma.11G149200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11614760-11616759 Glycine max
Glyma.11G149200 2.0kb downstream 2.0kb downstream 5346 true Chr11: 11609414-11614759 Glycine max
Glyma.11G149200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11609414-11611413 Glycine max
Glyma.11G149200 5.0kb upstream 5.0kb upstream 8346 true Chr11: 11611414-11619759 Glycine max
Glyma.11G149200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11614760-11619759 Glycine max
Glyma.11G149200 5.0kb downstream 5.0kb downstream 8346 true Chr11: 11606414-11614759 Glycine max
Glyma.11G149200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11606414-11611413 Glycine max
Glyma.11G149200 10.0kb upstream 10.0kb upstream 13346 true Chr11: 11611414-11624759 Glycine max
Glyma.11G149200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11614760-11624759 Glycine max
Glyma.11G149200 10.0kb downstream 10.0kb downstream 13346 true Chr11: 11601414-11614759 Glycine max
Glyma.11G149200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11601414-11611413 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298893 5265 Fabidae View MSA
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.61417 0.0 2.19419    
cufflinks 9.73322 0.0 26.0403   High
cufflinks 0.463116 0.0 1.67778    
cufflinks 0.432146 0.0 1.57546    
cufflinks 0.798474 0.0 2.79886    
cufflinks 0.533237 0.0 1.92389    
cufflinks 0.69551 0.0 2.46361    
cufflinks 1.38756 0.0 4.54316    
cufflinks 0.381558 0.0 1.40262    
cufflinks 0.494        
cufflinks 0.039     Low Low
cufflinks 0.894        
cufflinks 0.329        
cufflinks 0.278        
cufflinks 0.018     Low Low
cufflinks 3.189       High
cufflinks 0.205        
cufflinks 1.389        
cufflinks 6.155       High
cufflinks 1.789        
cufflinks 0.138        
cufflinks 1.993        
cufflinks 2.266        
cufflinks 0.052     Low Low
cufflinks 1.789        
cufflinks 0.234        

0 Strain