Gene : Glyma.11G151300 G. max Wm82.a2.v1

Defline:  (1 of 4) PTHR15893 - RIBOSOMAL PROTEIN L27 Genomic Order:  1513
Name:  ? Glyma.11G151300 Secondary Identifier:  ? PAC:30528248

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G151300 0.5kb upstream 0.5kb upstream 4201 true Chr11: 11948074-11952274 Glycine max
Glyma.11G151300 0.5kb upstream 0.5kb upstream 500 false Chr11: 11948074-11948573 Glycine max
Glyma.11G151300 0.5kb downstream 0.5kb downstream 4201 true Chr11: 11948574-11952774 Glycine max
Glyma.11G151300 0.5kb downstream 0.5kb downstream 500 false Chr11: 11952275-11952774 Glycine max
Glyma.11G151300 1.0kb upstream 1.0kb upstream 4701 true Chr11: 11947574-11952274 Glycine max
Glyma.11G151300 1.0kb upstream 1.0kb upstream 1000 false Chr11: 11947574-11948573 Glycine max
Glyma.11G151300 1.0kb downstream 1.0kb downstream 4701 true Chr11: 11948574-11953274 Glycine max
Glyma.11G151300 1.0kb downstream 1.0kb downstream 1000 false Chr11: 11952275-11953274 Glycine max
Glyma.11G151300 2.0kb upstream 2.0kb upstream 5701 true Chr11: 11946574-11952274 Glycine max
Glyma.11G151300 2.0kb upstream 2.0kb upstream 2000 false Chr11: 11946574-11948573 Glycine max
Glyma.11G151300 2.0kb downstream 2.0kb downstream 5701 true Chr11: 11948574-11954274 Glycine max
Glyma.11G151300 2.0kb downstream 2.0kb downstream 2000 false Chr11: 11952275-11954274 Glycine max
Glyma.11G151300 5.0kb upstream 5.0kb upstream 8701 true Chr11: 11943574-11952274 Glycine max
Glyma.11G151300 5.0kb upstream 5.0kb upstream 5000 false Chr11: 11943574-11948573 Glycine max
Glyma.11G151300 5.0kb downstream 5.0kb downstream 8701 true Chr11: 11948574-11957274 Glycine max
Glyma.11G151300 5.0kb downstream 5.0kb downstream 5000 false Chr11: 11952275-11957274 Glycine max
Glyma.11G151300 10.0kb upstream 10.0kb upstream 13701 true Chr11: 11938574-11952274 Glycine max
Glyma.11G151300 10.0kb upstream 10.0kb upstream 10000 false Chr11: 11938574-11948573 Glycine max
Glyma.11G151300 10.0kb downstream 10.0kb downstream 13701 true Chr11: 11948574-11962274 Glycine max
Glyma.11G151300 10.0kb downstream 10.0kb downstream 10000 false Chr11: 11952275-11962274 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301316 5265 Fabidae View MSA
124063314 5270 Rosid View MSA
123738947 5271 Pentapetalae View MSA
122793743 5272 Eudicot View MSA
122042645 5273 Angiosperm View MSA
123429095 5275 Viridiplantae View MSA
121344050 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 69.8799 0.0 190.742 High High
cufflinks 59.6121 0.0 160.921 High High
cufflinks 8.19278 0.0 24.5762    
cufflinks 17.3359 0.0 47.59    
cufflinks 10.7193 0.0 30.6951    
cufflinks 11.2282 0.0 32.0598    
cufflinks 20.0353 0.0 54.3514    
cufflinks 21.7353 0.0 58.7895 High  
cufflinks 5.32447 0.0 16.8573   Low
cufflinks 8.85     High  
cufflinks 0.455       Low
cufflinks 3.606        
cufflinks 1.044        
cufflinks 1.443        
cufflinks 0.63        
cufflinks 39.458     High High
cufflinks 0.386       Low
cufflinks 4.512        
cufflinks 9.673     High  
cufflinks 38.256     High High
cufflinks 0.563       Low
cufflinks 34.883     High High
cufflinks 31.543     High High
cufflinks 0.456       Low
cufflinks 38.932     High High
cufflinks 0.638        

0 Strain