Gene : Glyma.11G138700 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR21717:SF9 - PROTEIN TBF1 Genomic Order:  1387
Name:  ? Glyma.11G138700 Secondary Identifier:  ? PAC:30530835
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G138700 0.5kb upstream 0.5kb upstream 5766 true Chr11: 10549568-10555333 Glycine max
Glyma.11G138700 0.5kb upstream 0.5kb upstream 500 false Chr11: 10554834-10555333 Glycine max
Glyma.11G138700 0.5kb downstream 0.5kb downstream 5766 true Chr11: 10549068-10554833 Glycine max
Glyma.11G138700 0.5kb downstream 0.5kb downstream 500 false Chr11: 10549068-10549567 Glycine max
Glyma.11G138700 1.0kb upstream 1.0kb upstream 6266 true Chr11: 10549568-10555833 Glycine max
Glyma.11G138700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10554834-10555833 Glycine max
Glyma.11G138700 1.0kb downstream 1.0kb downstream 6266 true Chr11: 10548568-10554833 Glycine max
Glyma.11G138700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10548568-10549567 Glycine max
Glyma.11G138700 2.0kb upstream 2.0kb upstream 7266 true Chr11: 10549568-10556833 Glycine max
Glyma.11G138700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10554834-10556833 Glycine max
Glyma.11G138700 2.0kb downstream 2.0kb downstream 7266 true Chr11: 10547568-10554833 Glycine max
Glyma.11G138700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10547568-10549567 Glycine max
Glyma.11G138700 5.0kb upstream 5.0kb upstream 10266 true Chr11: 10549568-10559833 Glycine max
Glyma.11G138700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10554834-10559833 Glycine max
Glyma.11G138700 5.0kb downstream 5.0kb downstream 10266 true Chr11: 10544568-10554833 Glycine max
Glyma.11G138700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10544568-10549567 Glycine max
Glyma.11G138700 10.0kb upstream 10.0kb upstream 15266 true Chr11: 10549568-10564833 Glycine max
Glyma.11G138700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10554834-10564833 Glycine max
Glyma.11G138700 10.0kb downstream 10.0kb downstream 15266 true Chr11: 10539568-10554833 Glycine max
Glyma.11G138700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10539568-10549567 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254943 5265 Fabidae View MSA
124063345 5270 Rosid View MSA
123753061 5271 Pentapetalae View MSA
122788041 5272 Eudicot View MSA
122049318 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348439 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.8671 0.0 82.1878    
cufflinks 14.4141 0.0 72.0062    
cufflinks 50.7598 0.0 373.544 High High
cufflinks 16.8445 0.0 92.6632    
cufflinks 8.31949 0.0 41.7267    
cufflinks 8.54703 0.0 39.6711    
cufflinks 13.5638 0.0 68.9991    
cufflinks 12.98 0.0 59.6073    
cufflinks 9.24481 0.0 50.2869    
cufflinks 1.023        
cufflinks 0.809        
cufflinks 1.555        
cufflinks 0.722        
cufflinks 0.703       Low
cufflinks 0.615       Low
cufflinks 2.123       High
cufflinks 0.554       Low
cufflinks 1.86        
cufflinks 1.395        
cufflinks 2.04       High
cufflinks 0.71       Low
cufflinks 2.311       High
cufflinks 1.562        
cufflinks 1.091        
cufflinks 2.0       High
cufflinks 0.846        

0 Strain