Gene : Glyma.11G140100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23315:SF69 - U-BOX DOMAIN-CONTAINING PROTEIN 12-RELATED Genomic Order:  1401
Name:  ? Glyma.11G140100 Secondary Identifier:  ? PAC:30530588
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-7511 Glycine max pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G140100 0.5kb upstream 0.5kb upstream 5213 true Chr11: 10676671-10681883 Glycine max
Glyma.11G140100 0.5kb upstream 0.5kb upstream 500 false Chr11: 10676671-10677170 Glycine max
Glyma.11G140100 0.5kb downstream 0.5kb downstream 5213 true Chr11: 10677171-10682383 Glycine max
Glyma.11G140100 0.5kb downstream 0.5kb downstream 500 false Chr11: 10681884-10682383 Glycine max
Glyma.11G140100 1.0kb upstream 1.0kb upstream 5713 true Chr11: 10676171-10681883 Glycine max
Glyma.11G140100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10676171-10677170 Glycine max
Glyma.11G140100 1.0kb downstream 1.0kb downstream 5713 true Chr11: 10677171-10682883 Glycine max
Glyma.11G140100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10681884-10682883 Glycine max
Glyma.11G140100 2.0kb upstream 2.0kb upstream 6713 true Chr11: 10675171-10681883 Glycine max
Glyma.11G140100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10675171-10677170 Glycine max
Glyma.11G140100 2.0kb downstream 2.0kb downstream 6713 true Chr11: 10677171-10683883 Glycine max
Glyma.11G140100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10681884-10683883 Glycine max
Glyma.11G140100 5.0kb upstream 5.0kb upstream 9713 true Chr11: 10672171-10681883 Glycine max
Glyma.11G140100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10672171-10677170 Glycine max
Glyma.11G140100 5.0kb downstream 5.0kb downstream 9713 true Chr11: 10677171-10686883 Glycine max
Glyma.11G140100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10681884-10686883 Glycine max
Glyma.11G140100 10.0kb upstream 10.0kb upstream 14713 true Chr11: 10667171-10681883 Glycine max
Glyma.11G140100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10667171-10677170 Glycine max
Glyma.11G140100 10.0kb downstream 10.0kb downstream 14713 true Chr11: 10677171-10691883 Glycine max
Glyma.11G140100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10681884-10691883 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027848 5273 Angiosperm View MSA
124063850 5270 Rosid View MSA
122304792 5265 Fabidae View MSA
123736546 5271 Pentapetalae View MSA
122787346 5272 Eudicot View MSA
121349135 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.7968 0.0 143.639 High High
cufflinks 15.5829 0.0 41.8394   Low
cufflinks 30.0589 0.0 85.0121 High  
cufflinks 16.8484 0.0 45.4296    
cufflinks 25.255 0.0 70.0914 High  
cufflinks 39.5977 0.0 115.764 High High
cufflinks 12.0649 0.0 32.204   Low
cufflinks 29.9066 0.0 84.4795 High  
cufflinks 27.6376 0.0 77.3001 High  
cufflinks 20.071     High  
cufflinks 32.658     High High
cufflinks 14.882     High  
cufflinks 17.872     High  
cufflinks 14.972     High  
cufflinks 14.142     High  
cufflinks 16.756     High  
cufflinks 16.528     High  
cufflinks 16.487     High  
cufflinks 11.385     High Low
cufflinks 21.296     High  
cufflinks 28.415     High High
cufflinks 18.011     High  
cufflinks 13.766     High Low
cufflinks 32.694     High High
cufflinks 20.526     High  
cufflinks 21.699     High  

0 Strain