Gene : Glyma.11G140500 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR19375:SF232 - MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 37E-RELATED Genomic Order:  1405
Name:  ? Glyma.11G140500 Secondary Identifier:  ? PAC:30527843
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G140500 0.5kb upstream 0.5kb upstream 3452 true Chr11: 10727496-10730947 Glycine max
Glyma.11G140500 0.5kb upstream 0.5kb upstream 500 false Chr11: 10730448-10730947 Glycine max
Glyma.11G140500 0.5kb downstream 0.5kb downstream 3452 true Chr11: 10726996-10730447 Glycine max
Glyma.11G140500 0.5kb downstream 0.5kb downstream 500 false Chr11: 10726996-10727495 Glycine max
Glyma.11G140500 1.0kb upstream 1.0kb upstream 3952 true Chr11: 10727496-10731447 Glycine max
Glyma.11G140500 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10730448-10731447 Glycine max
Glyma.11G140500 1.0kb downstream 1.0kb downstream 3952 true Chr11: 10726496-10730447 Glycine max
Glyma.11G140500 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10726496-10727495 Glycine max
Glyma.11G140500 2.0kb upstream 2.0kb upstream 4952 true Chr11: 10727496-10732447 Glycine max
Glyma.11G140500 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10730448-10732447 Glycine max
Glyma.11G140500 2.0kb downstream 2.0kb downstream 4952 true Chr11: 10725496-10730447 Glycine max
Glyma.11G140500 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10725496-10727495 Glycine max
Glyma.11G140500 5.0kb upstream 5.0kb upstream 7952 true Chr11: 10727496-10735447 Glycine max
Glyma.11G140500 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10730448-10735447 Glycine max
Glyma.11G140500 5.0kb downstream 5.0kb downstream 7952 true Chr11: 10722496-10730447 Glycine max
Glyma.11G140500 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10722496-10727495 Glycine max
Glyma.11G140500 10.0kb upstream 10.0kb upstream 12952 true Chr11: 10727496-10740447 Glycine max
Glyma.11G140500 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10730448-10740447 Glycine max
Glyma.11G140500 10.0kb downstream 10.0kb downstream 12952 true Chr11: 10717496-10730447 Glycine max
Glyma.11G140500 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10717496-10727495 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311678 5265 Fabidae View MSA
124071606 5270 Rosid View MSA
123753199 5271 Pentapetalae View MSA
122797693 5272 Eudicot View MSA
122051630 5273 Angiosperm View MSA
121350405 5274 Embryophyte View MSA
123428541 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 75.2266 0.0 241.382 High  
cufflinks 57.9991 0.0 176.62 High  
cufflinks 38.8874 0.0 111.983 High Low
cufflinks 307.774 0.0 1482.4 High High
cufflinks 109.825 0.0 382.616 High  
cufflinks 74.2602 0.0 237.133 High  
cufflinks 104.303 0.0 358.3 High  
cufflinks 114.944 0.0 403.935 High  
cufflinks 146.668 0.0 548.663 High  
cufflinks 113.625     High  
cufflinks 143.94     High High
cufflinks 87.446     High  
cufflinks 47.874     High  
cufflinks 26.327     High  
cufflinks 167.84     High High
cufflinks 22.232     High Low
cufflinks 198.35     High High
cufflinks 122.328     High  
cufflinks 38.708     High  
cufflinks 13.876     High Low
cufflinks 76.927     High  
cufflinks 18.626     High Low
cufflinks 44.907     High  
cufflinks 73.311     High  
cufflinks 16.888     High Low
cufflinks 94.809     High  

0 Strain