Gene : Glyma.11G142700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10927 - RIBOSOME MATURATION PROTEIN SBDS Genomic Order:  1427
Name:  ? Glyma.11G142700 Secondary Identifier:  ? PAC:30527812
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G142700 0.5kb upstream 0.5kb upstream 4185 true Chr11: 10888988-10893172 Glycine max
Glyma.11G142700 0.5kb upstream 0.5kb upstream 500 false Chr11: 10888988-10889487 Glycine max
Glyma.11G142700 0.5kb downstream 0.5kb downstream 4185 true Chr11: 10889488-10893672 Glycine max
Glyma.11G142700 0.5kb downstream 0.5kb downstream 500 false Chr11: 10893173-10893672 Glycine max
Glyma.11G142700 1.0kb upstream 1.0kb upstream 4685 true Chr11: 10888488-10893172 Glycine max
Glyma.11G142700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10888488-10889487 Glycine max
Glyma.11G142700 1.0kb downstream 1.0kb downstream 4685 true Chr11: 10889488-10894172 Glycine max
Glyma.11G142700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10893173-10894172 Glycine max
Glyma.11G142700 2.0kb upstream 2.0kb upstream 5685 true Chr11: 10887488-10893172 Glycine max
Glyma.11G142700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10887488-10889487 Glycine max
Glyma.11G142700 2.0kb downstream 2.0kb downstream 5685 true Chr11: 10889488-10895172 Glycine max
Glyma.11G142700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10893173-10895172 Glycine max
Glyma.11G142700 5.0kb upstream 5.0kb upstream 8685 true Chr11: 10884488-10893172 Glycine max
Glyma.11G142700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10884488-10889487 Glycine max
Glyma.11G142700 5.0kb downstream 5.0kb downstream 8685 true Chr11: 10889488-10898172 Glycine max
Glyma.11G142700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10893173-10898172 Glycine max
Glyma.11G142700 10.0kb upstream 10.0kb upstream 13685 true Chr11: 10879488-10893172 Glycine max
Glyma.11G142700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10879488-10889487 Glycine max
Glyma.11G142700 10.0kb downstream 10.0kb downstream 13685 true Chr11: 10889488-10903172 Glycine max
Glyma.11G142700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10893173-10903172 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301541 5265 Fabidae View MSA
124061735 5270 Rosid View MSA
123739408 5271 Pentapetalae View MSA
122786845 5272 Eudicot View MSA
122043852 5273 Angiosperm View MSA
121346736 5274 Embryophyte View MSA
123428704 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.6198 0.0 74.7795   High
cufflinks 9.44905 0.0 34.2911    
cufflinks 13.6646 0.0 46.8972    
cufflinks 6.23107 0.0 24.0518   Low
cufflinks 12.9748 0.0 45.3767    
cufflinks 13.5353 0.0 47.1459    
cufflinks 14.6264 0.0 50.2083    
cufflinks 10.8977 0.0 38.4485    
cufflinks 10.2154 0.0 36.3735    
cufflinks 1.014       Low
cufflinks 5.702     High High
cufflinks 1.604        
cufflinks 2.583        
cufflinks 3.058        
cufflinks 3.623        
cufflinks 1.862        
cufflinks 1.26       Low
cufflinks 1.505        
cufflinks 1.573        
cufflinks 1.706        
cufflinks 4.115       High
cufflinks 1.985        
cufflinks 1.916        
cufflinks 5.444       High
cufflinks 1.908        
cufflinks 2.329        

0 Strain