Gene : Glyma.11G143400 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11620//PTHR11620:SF14 - 60S RIBOSOMAL PROTEIN L23A Genomic Order:  1434
Name:  ? Glyma.11G143400 Secondary Identifier:  ? PAC:30530653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G143400 0.5kb upstream 0.5kb upstream 3266 true Chr11: 10950967-10954232 Glycine max
Glyma.11G143400 0.5kb upstream 0.5kb upstream 500 false Chr11: 10953733-10954232 Glycine max
Glyma.11G143400 0.5kb downstream 0.5kb downstream 3266 true Chr11: 10950467-10953732 Glycine max
Glyma.11G143400 0.5kb downstream 0.5kb downstream 500 false Chr11: 10950467-10950966 Glycine max
Glyma.11G143400 1.0kb upstream 1.0kb upstream 3766 true Chr11: 10950967-10954732 Glycine max
Glyma.11G143400 1.0kb upstream 1.0kb upstream 1000 false Chr11: 10953733-10954732 Glycine max
Glyma.11G143400 1.0kb downstream 1.0kb downstream 3766 true Chr11: 10949967-10953732 Glycine max
Glyma.11G143400 1.0kb downstream 1.0kb downstream 1000 false Chr11: 10949967-10950966 Glycine max
Glyma.11G143400 2.0kb upstream 2.0kb upstream 4766 true Chr11: 10950967-10955732 Glycine max
Glyma.11G143400 2.0kb upstream 2.0kb upstream 2000 false Chr11: 10953733-10955732 Glycine max
Glyma.11G143400 2.0kb downstream 2.0kb downstream 4766 true Chr11: 10948967-10953732 Glycine max
Glyma.11G143400 2.0kb downstream 2.0kb downstream 2000 false Chr11: 10948967-10950966 Glycine max
Glyma.11G143400 5.0kb upstream 5.0kb upstream 7766 true Chr11: 10950967-10958732 Glycine max
Glyma.11G143400 5.0kb upstream 5.0kb upstream 5000 false Chr11: 10953733-10958732 Glycine max
Glyma.11G143400 5.0kb downstream 5.0kb downstream 7766 true Chr11: 10945967-10953732 Glycine max
Glyma.11G143400 5.0kb downstream 5.0kb downstream 5000 false Chr11: 10945967-10950966 Glycine max
Glyma.11G143400 10.0kb upstream 10.0kb upstream 12766 true Chr11: 10950967-10963732 Glycine max
Glyma.11G143400 10.0kb upstream 10.0kb upstream 10000 false Chr11: 10953733-10963732 Glycine max
Glyma.11G143400 10.0kb downstream 10.0kb downstream 12766 true Chr11: 10940967-10953732 Glycine max
Glyma.11G143400 10.0kb downstream 10.0kb downstream 10000 false Chr11: 10940967-10950966 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315036 5265 Fabidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 113.242 0.0 435.343 High  
cufflinks 147.537 0.0 614.7 High  
cufflinks 60.3883 0.0 206.439 High Low
cufflinks 109.491 0.0 418.41 High  
cufflinks 265.541 0.0 1179.8 High High
cufflinks 181.256 0.0 688.888 High  
cufflinks 271.835 0.0 1213.39 High High
cufflinks 127.644 0.0 514.916 High  
cufflinks 177.339 0.0 671.128 High  
cufflinks 22.74     High  
cufflinks 8.54     High Low
cufflinks 19.695     High  
cufflinks 71.588     High High
cufflinks 98.516     High High
cufflinks 10.056     High Low
cufflinks 18.851     High  
cufflinks 15.566     High  
cufflinks 20.972     High  
cufflinks 28.851     High  
cufflinks 13.931     High  
cufflinks 14.49     High  
cufflinks 14.903     High  
cufflinks 24.102     High  
cufflinks 10.028     High Low
cufflinks 16.768     High  
cufflinks 16.058     High  

0 Strain