Gene : Glyma.11G202700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22904:SF373 - PROTEIN TIC 40, CHLOROPLASTIC Genomic Order:  2027
Name:  ? Glyma.11G202700 Secondary Identifier:  ? PAC:30530107
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G202700 0.5kb upstream 0.5kb upstream 8480 true Chr11: 28336564-28345043 Glycine max
Glyma.11G202700 0.5kb upstream 0.5kb upstream 500 false Chr11: 28336564-28337063 Glycine max
Glyma.11G202700 0.5kb downstream 0.5kb downstream 8480 true Chr11: 28337064-28345543 Glycine max
Glyma.11G202700 0.5kb downstream 0.5kb downstream 500 false Chr11: 28345044-28345543 Glycine max
Glyma.11G202700 1.0kb upstream 1.0kb upstream 8980 true Chr11: 28336064-28345043 Glycine max
Glyma.11G202700 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28336064-28337063 Glycine max
Glyma.11G202700 1.0kb downstream 1.0kb downstream 8980 true Chr11: 28337064-28346043 Glycine max
Glyma.11G202700 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28345044-28346043 Glycine max
Glyma.11G202700 2.0kb upstream 2.0kb upstream 9980 true Chr11: 28335064-28345043 Glycine max
Glyma.11G202700 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28335064-28337063 Glycine max
Glyma.11G202700 2.0kb downstream 2.0kb downstream 9980 true Chr11: 28337064-28347043 Glycine max
Glyma.11G202700 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28345044-28347043 Glycine max
Glyma.11G202700 5.0kb upstream 5.0kb upstream 12980 true Chr11: 28332064-28345043 Glycine max
Glyma.11G202700 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28332064-28337063 Glycine max
Glyma.11G202700 5.0kb downstream 5.0kb downstream 12980 true Chr11: 28337064-28350043 Glycine max
Glyma.11G202700 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28345044-28350043 Glycine max
Glyma.11G202700 10.0kb upstream 10.0kb upstream 17980 true Chr11: 28327064-28345043 Glycine max
Glyma.11G202700 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28327064-28337063 Glycine max
Glyma.11G202700 10.0kb downstream 10.0kb downstream 17980 true Chr11: 28337064-28355043 Glycine max
Glyma.11G202700 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28345044-28355043 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306461 5265 Fabidae View MSA
124060602 5270 Rosid View MSA
123738700 5271 Pentapetalae View MSA
122785851 5272 Eudicot View MSA
122043574 5273 Angiosperm View MSA
121344558 5274 Embryophyte View MSA
123424576 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5745 0.0 85.6283   High
cufflinks 15.1568 0.0 63.1942    
cufflinks 10.8019 0.0 41.5805    
cufflinks 13.8097 0.0 52.3573    
cufflinks 12.4666 0.0 52.4388    
cufflinks 10.5383 0.0 53.0675    
cufflinks 15.3393 0.0 59.0074    
cufflinks 10.0697 0.0 49.9811    
cufflinks 9.79151 0.0 41.6882   Low
cufflinks 0.474        
cufflinks 0.354       Low
cufflinks 0.545        
cufflinks 0.578        
cufflinks 0.595        
cufflinks 0.275       Low
cufflinks 1.001       High
cufflinks 0.511        
cufflinks 0.603        
cufflinks 0.803        
cufflinks 0.937       High
cufflinks 0.318       Low
cufflinks 0.927       High
cufflinks 1.171       High
cufflinks 0.453        
cufflinks 0.936       High
cufflinks 0.3       Low

0 Strain