Gene : Glyma.11G203000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31852:SF1 - LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN-RELATED Genomic Order:  2030
Name:  ? Glyma.11G203000 Secondary Identifier:  ? PAC:30527758
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G203000 0.5kb upstream 0.5kb upstream 1887 true Chr11: 28356579-28358465 Glycine max
Glyma.11G203000 0.5kb upstream 0.5kb upstream 500 false Chr11: 28356579-28357078 Glycine max
Glyma.11G203000 0.5kb downstream 0.5kb downstream 1887 true Chr11: 28357079-28358965 Glycine max
Glyma.11G203000 0.5kb downstream 0.5kb downstream 500 false Chr11: 28358466-28358965 Glycine max
Glyma.11G203000 1.0kb upstream 1.0kb upstream 2387 true Chr11: 28356079-28358465 Glycine max
Glyma.11G203000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 28356079-28357078 Glycine max
Glyma.11G203000 1.0kb downstream 1.0kb downstream 2387 true Chr11: 28357079-28359465 Glycine max
Glyma.11G203000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 28358466-28359465 Glycine max
Glyma.11G203000 2.0kb upstream 2.0kb upstream 3387 true Chr11: 28355079-28358465 Glycine max
Glyma.11G203000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 28355079-28357078 Glycine max
Glyma.11G203000 2.0kb downstream 2.0kb downstream 3387 true Chr11: 28357079-28360465 Glycine max
Glyma.11G203000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 28358466-28360465 Glycine max
Glyma.11G203000 5.0kb upstream 5.0kb upstream 6387 true Chr11: 28352079-28358465 Glycine max
Glyma.11G203000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 28352079-28357078 Glycine max
Glyma.11G203000 5.0kb downstream 5.0kb downstream 6387 true Chr11: 28357079-28363465 Glycine max
Glyma.11G203000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 28358466-28363465 Glycine max
Glyma.11G203000 10.0kb upstream 10.0kb upstream 11387 true Chr11: 28347079-28358465 Glycine max
Glyma.11G203000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 28347079-28357078 Glycine max
Glyma.11G203000 10.0kb downstream 10.0kb downstream 11387 true Chr11: 28357079-28368465 Glycine max
Glyma.11G203000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 28358466-28368465 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313282 5265 Fabidae View MSA
124063776 5270 Rosid View MSA
123751487 5271 Pentapetalae View MSA
122787858 5272 Eudicot View MSA
122044505 5273 Angiosperm View MSA
121351108 5274 Embryophyte View MSA
123382008 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.55168 0.0 5.47866    
cufflinks 3.43819 0.0 11.0817    
cufflinks 1.45818 0.0 5.14244    
cufflinks 0.323733 0.0 1.24214    
cufflinks 2.53241 0.0 8.53532    
cufflinks 12.3477 0.0 33.9986   High
cufflinks 0.048539 0.0 0.202679 Low Low
cufflinks 1.03988 0.0 3.76778    
cufflinks 2.53578 0.0 8.51753    
cufflinks 2.641        
cufflinks 79.234     High High
cufflinks 0.709       Low
cufflinks 4.167        
cufflinks 0.245       Low
cufflinks 3.271        
cufflinks 2.87        
cufflinks 32.644     High  
cufflinks 1.309        
cufflinks 6.388        
cufflinks 1.389        
cufflinks 45.214     High High
cufflinks 2.372        
cufflinks 5.558        
cufflinks 137.263     High High
cufflinks 2.021        
cufflinks 87.839     High High

0 Strain