Gene : Glyma.11G189000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11119:SF28 - NUCLEOBASE-ASCORBATE TRANSPORTER 12 Genomic Order:  1890
Name:  ? Glyma.11G189000 Secondary Identifier:  ? PAC:30531384
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G189000 0.5kb upstream 0.5kb upstream 8535 true Chr11: 26065473-26074007 Glycine max
Glyma.11G189000 0.5kb upstream 0.5kb upstream 500 false Chr11: 26065473-26065972 Glycine max
Glyma.11G189000 0.5kb downstream 0.5kb downstream 8535 true Chr11: 26065973-26074507 Glycine max
Glyma.11G189000 0.5kb downstream 0.5kb downstream 500 false Chr11: 26074008-26074507 Glycine max
Glyma.11G189000 1.0kb upstream 1.0kb upstream 9035 true Chr11: 26064973-26074007 Glycine max
Glyma.11G189000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 26064973-26065972 Glycine max
Glyma.11G189000 1.0kb downstream 1.0kb downstream 9035 true Chr11: 26065973-26075007 Glycine max
Glyma.11G189000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 26074008-26075007 Glycine max
Glyma.11G189000 2.0kb upstream 2.0kb upstream 10035 true Chr11: 26063973-26074007 Glycine max
Glyma.11G189000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 26063973-26065972 Glycine max
Glyma.11G189000 2.0kb downstream 2.0kb downstream 10035 true Chr11: 26065973-26076007 Glycine max
Glyma.11G189000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 26074008-26076007 Glycine max
Glyma.11G189000 5.0kb upstream 5.0kb upstream 13035 true Chr11: 26060973-26074007 Glycine max
Glyma.11G189000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 26060973-26065972 Glycine max
Glyma.11G189000 5.0kb downstream 5.0kb downstream 13035 true Chr11: 26065973-26079007 Glycine max
Glyma.11G189000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 26074008-26079007 Glycine max
Glyma.11G189000 10.0kb upstream 10.0kb upstream 18035 true Chr11: 26055973-26074007 Glycine max
Glyma.11G189000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 26055973-26065972 Glycine max
Glyma.11G189000 10.0kb downstream 10.0kb downstream 18035 true Chr11: 26065973-26084007 Glycine max
Glyma.11G189000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 26074008-26084007 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312562 5265 Fabidae View MSA
124074779 5270 Rosid View MSA
123742744 5271 Pentapetalae View MSA
122788188 5272 Eudicot View MSA
122046196 5273 Angiosperm View MSA
121347942 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.71766 0.0 8.17644   Low
cufflinks 10.2003 0.0 27.3119    
cufflinks 13.1176 0.0 34.9963   High
cufflinks 8.09593 0.0 21.8679    
cufflinks 6.03323 0.0 16.5606    
cufflinks 2.06781 0.0 6.45461   Low
cufflinks 7.64286 0.0 20.6785    
cufflinks 9.615 0.0 25.7978    
cufflinks 4.18388 0.0 11.9092    
cufflinks 2.67        
cufflinks 0.159       Low
cufflinks 2.83        
cufflinks 1.185        
cufflinks 1.458        
cufflinks 0.219       Low
cufflinks 1.895        
cufflinks 0.604        
cufflinks 3.396       High
cufflinks 4.028       High
cufflinks 2.016        
cufflinks 0.201       Low
cufflinks 2.131        
cufflinks 2.537        
cufflinks 0.214       Low
cufflinks 2.063        
cufflinks 0.259       Low

0 Strain