Gene : Glyma.11G182600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23177:SF20 - RHO GTPASE-ACTIVATING PROTEIN 1-RELATED Genomic Order:  1826
Name:  ? Glyma.11G182600 Secondary Identifier:  ? PAC:30529608
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G182600 0.5kb upstream 0.5kb upstream 5117 true Chr11: 24998933-25004049 Glycine max
Glyma.11G182600 0.5kb upstream 0.5kb upstream 500 false Chr11: 25003550-25004049 Glycine max
Glyma.11G182600 0.5kb downstream 0.5kb downstream 5117 true Chr11: 24998433-25003549 Glycine max
Glyma.11G182600 0.5kb downstream 0.5kb downstream 500 false Chr11: 24998433-24998932 Glycine max
Glyma.11G182600 1.0kb upstream 1.0kb upstream 5617 true Chr11: 24998933-25004549 Glycine max
Glyma.11G182600 1.0kb upstream 1.0kb upstream 1000 false Chr11: 25003550-25004549 Glycine max
Glyma.11G182600 1.0kb downstream 1.0kb downstream 5617 true Chr11: 24997933-25003549 Glycine max
Glyma.11G182600 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24997933-24998932 Glycine max
Glyma.11G182600 2.0kb upstream 2.0kb upstream 6617 true Chr11: 24998933-25005549 Glycine max
Glyma.11G182600 2.0kb upstream 2.0kb upstream 2000 false Chr11: 25003550-25005549 Glycine max
Glyma.11G182600 2.0kb downstream 2.0kb downstream 6617 true Chr11: 24996933-25003549 Glycine max
Glyma.11G182600 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24996933-24998932 Glycine max
Glyma.11G182600 5.0kb upstream 5.0kb upstream 9617 true Chr11: 24998933-25008549 Glycine max
Glyma.11G182600 5.0kb upstream 5.0kb upstream 5000 false Chr11: 25003550-25008549 Glycine max
Glyma.11G182600 5.0kb downstream 5.0kb downstream 9617 true Chr11: 24993933-25003549 Glycine max
Glyma.11G182600 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24993933-24998932 Glycine max
Glyma.11G182600 10.0kb upstream 10.0kb upstream 14617 true Chr11: 24998933-25013549 Glycine max
Glyma.11G182600 10.0kb upstream 10.0kb upstream 10000 false Chr11: 25003550-25013549 Glycine max
Glyma.11G182600 10.0kb downstream 10.0kb downstream 14617 true Chr11: 24988933-25003549 Glycine max
Glyma.11G182600 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24988933-24998932 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306505 5265 Fabidae View MSA
124070990 5270 Rosid View MSA
123748530 5271 Pentapetalae View MSA
122791760 5272 Eudicot View MSA
122045219 5273 Angiosperm View MSA
121350100 5274 Embryophyte View MSA
123381579 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.20791 0.0 15.6454    
cufflinks 14.6319 0.0 65.7159   High
cufflinks 2.12558 0.0 12.1339    
cufflinks 2.39364 0.0 15.6261    
cufflinks 1.49166 0.0 9.41868   Low
cufflinks 4.68365 0.0 22.3465    
cufflinks 3.27284 0.0 18.0943    
cufflinks 5.92998 0.0 24.2458    
cufflinks 1.37391 0.0 7.59138   Low
cufflinks 1.157        
cufflinks 0.023     Low  
cufflinks 0.798        
cufflinks 0.139        
cufflinks 0.222        
cufflinks 0.001     Low Low
cufflinks 1.783        
cufflinks 0.078        
cufflinks 0.885        
cufflinks 2.898       High
cufflinks 2.081        
cufflinks 0.01     Low Low
cufflinks 2.114        
cufflinks 2.497        
cufflinks 0.014     Low Low
cufflinks 1.785        
cufflinks 0.039     Low  

0 Strain