Gene : Glyma.11G180000 G. max Wm82.a2.v1
Defline:  (1 of 9) PTHR12341 - 5'->3' EXORIBONUCLEASE Genomic Order:  1800
Name:  ? Glyma.11G180000 Secondary Identifier:  ? PAC:30530813
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G180000 0.5kb upstream 0.5kb upstream 6748 true Chr11: 24567879-24574626 Glycine max
Glyma.11G180000 0.5kb upstream 0.5kb upstream 500 false Chr11: 24567879-24568378 Glycine max
Glyma.11G180000 0.5kb downstream 0.5kb downstream 6748 true Chr11: 24568379-24575126 Glycine max
Glyma.11G180000 0.5kb downstream 0.5kb downstream 500 false Chr11: 24574627-24575126 Glycine max
Glyma.11G180000 1.0kb upstream 1.0kb upstream 7248 true Chr11: 24567379-24574626 Glycine max
Glyma.11G180000 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24567379-24568378 Glycine max
Glyma.11G180000 1.0kb downstream 1.0kb downstream 7248 true Chr11: 24568379-24575626 Glycine max
Glyma.11G180000 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24574627-24575626 Glycine max
Glyma.11G180000 2.0kb upstream 2.0kb upstream 8248 true Chr11: 24566379-24574626 Glycine max
Glyma.11G180000 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24566379-24568378 Glycine max
Glyma.11G180000 2.0kb downstream 2.0kb downstream 8248 true Chr11: 24568379-24576626 Glycine max
Glyma.11G180000 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24574627-24576626 Glycine max
Glyma.11G180000 5.0kb upstream 5.0kb upstream 11248 true Chr11: 24563379-24574626 Glycine max
Glyma.11G180000 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24563379-24568378 Glycine max
Glyma.11G180000 5.0kb downstream 5.0kb downstream 11248 true Chr11: 24568379-24579626 Glycine max
Glyma.11G180000 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24574627-24579626 Glycine max
Glyma.11G180000 10.0kb upstream 10.0kb upstream 16248 true Chr11: 24558379-24574626 Glycine max
Glyma.11G180000 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24558379-24568378 Glycine max
Glyma.11G180000 10.0kb downstream 10.0kb downstream 16248 true Chr11: 24568379-24584626 Glycine max
Glyma.11G180000 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24574627-24584626 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306137 5265 Fabidae View MSA
124038496 5270 Rosid View MSA
123744082 5271 Pentapetalae View MSA
122796616 5272 Eudicot View MSA
122050556 5273 Angiosperm View MSA
123429022 5275 Viridiplantae View MSA
121311990 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0502819 0.0 0.201295 Low  
cufflinks 0.0321732 0.0 0.131259 Low  
cufflinks 0.162215 0.0 0.619115 Low  
cufflinks 0.684023 0.0 2.41332   High
cufflinks 0.0579822 0.0 0.231057 Low  
cufflinks 0.0156309 0.0 0.0669866 Low Low
cufflinks 0.211048 0.0 0.798841    
cufflinks 0.237686 0.0 0.893253    
cufflinks 0.116965 0.0 0.453753 Low  
cufflinks 0.391       High
cufflinks 0.058        
cufflinks 0.243        
cufflinks 0.13        
cufflinks 0.093        
cufflinks 0.006     Low Low
cufflinks 0.103        
cufflinks 0.02     Low Low
cufflinks 0.4       High
cufflinks 0.105        
cufflinks 0.131        
cufflinks 0.048     Low  
cufflinks 0.11        
cufflinks 0.113        
cufflinks 0.06        
cufflinks 0.144        
cufflinks 0.094        

0 Strain