Gene : Glyma.11G180100 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12081//PTHR12081:SF47 - TRANSCRIPTION FACTOR E2F Genomic Order:  1801
Name:  ? Glyma.11G180100 Secondary Identifier:  ? PAC:30528462
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G180100 0.5kb upstream 0.5kb upstream 6695 true Chr11: 24576985-24583679 Glycine max
Glyma.11G180100 0.5kb upstream 0.5kb upstream 500 false Chr11: 24576985-24577484 Glycine max
Glyma.11G180100 0.5kb downstream 0.5kb downstream 6695 true Chr11: 24577485-24584179 Glycine max
Glyma.11G180100 0.5kb downstream 0.5kb downstream 500 false Chr11: 24583680-24584179 Glycine max
Glyma.11G180100 1.0kb upstream 1.0kb upstream 7195 true Chr11: 24576485-24583679 Glycine max
Glyma.11G180100 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24576485-24577484 Glycine max
Glyma.11G180100 1.0kb downstream 1.0kb downstream 7195 true Chr11: 24577485-24584679 Glycine max
Glyma.11G180100 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24583680-24584679 Glycine max
Glyma.11G180100 2.0kb upstream 2.0kb upstream 8195 true Chr11: 24575485-24583679 Glycine max
Glyma.11G180100 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24575485-24577484 Glycine max
Glyma.11G180100 2.0kb downstream 2.0kb downstream 8195 true Chr11: 24577485-24585679 Glycine max
Glyma.11G180100 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24583680-24585679 Glycine max
Glyma.11G180100 5.0kb upstream 5.0kb upstream 11195 true Chr11: 24572485-24583679 Glycine max
Glyma.11G180100 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24572485-24577484 Glycine max
Glyma.11G180100 5.0kb downstream 5.0kb downstream 11195 true Chr11: 24577485-24588679 Glycine max
Glyma.11G180100 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24583680-24588679 Glycine max
Glyma.11G180100 10.0kb upstream 10.0kb upstream 16195 true Chr11: 24567485-24583679 Glycine max
Glyma.11G180100 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24567485-24577484 Glycine max
Glyma.11G180100 10.0kb downstream 10.0kb downstream 16195 true Chr11: 24577485-24593679 Glycine max
Glyma.11G180100 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24583680-24593679 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304266 5265 Fabidae View MSA
124067172 5270 Rosid View MSA
123739560 5271 Pentapetalae View MSA
122789212 5272 Eudicot View MSA
122042305 5273 Angiosperm View MSA
121345510 5274 Embryophyte View MSA
123428750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.891288 0.0 3.11451   Low
cufflinks 2.77423 0.0 8.39938    
cufflinks 1.93911 0.0 6.16669    
cufflinks 2.00347 0.0 6.34584    
cufflinks 2.54606 0.0 7.79929    
cufflinks 1.80046 0.0 5.79894    
cufflinks 2.59087 0.0 7.94041    
cufflinks 2.40679 0.0 7.41731    
cufflinks 1.6729 0.0 5.43825    
cufflinks 0.602        
cufflinks 0.968        
cufflinks 0.565        
cufflinks 1.031        
cufflinks 0.847        
cufflinks 0.801        
cufflinks 0.723        
cufflinks 0.531       Low
cufflinks 0.624        
cufflinks 1.853       High
cufflinks 0.394       Low
cufflinks 1.068        
cufflinks 0.592        
cufflinks 0.94        
cufflinks 1.552       High
cufflinks 0.572        
cufflinks 1.242       High

0 Strain