Gene : Glyma.11G180200 G. max Wm82.a2.v1
Defline:  (1 of 4) KOG4526 - Predicted membrane protein Genomic Order:  1802
Name:  ? Glyma.11G180200 Secondary Identifier:  ? PAC:30531214
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.11G180200 0.5kb upstream 0.5kb upstream 2082 true Chr11: 24583864-24585945 Glycine max
Glyma.11G180200 0.5kb upstream 0.5kb upstream 500 false Chr11: 24585446-24585945 Glycine max
Glyma.11G180200 0.5kb downstream 0.5kb downstream 2082 true Chr11: 24583364-24585445 Glycine max
Glyma.11G180200 0.5kb downstream 0.5kb downstream 500 false Chr11: 24583364-24583863 Glycine max
Glyma.11G180200 1.0kb upstream 1.0kb upstream 2582 true Chr11: 24583864-24586445 Glycine max
Glyma.11G180200 1.0kb upstream 1.0kb upstream 1000 false Chr11: 24585446-24586445 Glycine max
Glyma.11G180200 1.0kb downstream 1.0kb downstream 2582 true Chr11: 24582864-24585445 Glycine max
Glyma.11G180200 1.0kb downstream 1.0kb downstream 1000 false Chr11: 24582864-24583863 Glycine max
Glyma.11G180200 2.0kb upstream 2.0kb upstream 3582 true Chr11: 24583864-24587445 Glycine max
Glyma.11G180200 2.0kb upstream 2.0kb upstream 2000 false Chr11: 24585446-24587445 Glycine max
Glyma.11G180200 2.0kb downstream 2.0kb downstream 3582 true Chr11: 24581864-24585445 Glycine max
Glyma.11G180200 2.0kb downstream 2.0kb downstream 2000 false Chr11: 24581864-24583863 Glycine max
Glyma.11G180200 5.0kb upstream 5.0kb upstream 6582 true Chr11: 24583864-24590445 Glycine max
Glyma.11G180200 5.0kb upstream 5.0kb upstream 5000 false Chr11: 24585446-24590445 Glycine max
Glyma.11G180200 5.0kb downstream 5.0kb downstream 6582 true Chr11: 24578864-24585445 Glycine max
Glyma.11G180200 5.0kb downstream 5.0kb downstream 5000 false Chr11: 24578864-24583863 Glycine max
Glyma.11G180200 10.0kb upstream 10.0kb upstream 11582 true Chr11: 24583864-24595445 Glycine max
Glyma.11G180200 10.0kb upstream 10.0kb upstream 10000 false Chr11: 24585446-24595445 Glycine max
Glyma.11G180200 10.0kb downstream 10.0kb downstream 11582 true Chr11: 24573864-24585445 Glycine max
Glyma.11G180200 10.0kb downstream 10.0kb downstream 10000 false Chr11: 24573864-24583863 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307335 5265 Fabidae View MSA
124066079 5270 Rosid View MSA
123739162 5271 Pentapetalae View MSA
122786877 5272 Eudicot View MSA
122046265 5273 Angiosperm View MSA
121346382 5274 Embryophyte View MSA
123424955 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 27.4501 0.0 73.944 High High
cufflinks 17.8949 0.0 49.4826    
cufflinks 11.6955 0.0 33.7115    
cufflinks 9.12713 0.0 27.175    
cufflinks 4.33621 0.0 14.3892   Low
cufflinks 6.57982 0.0 20.6265    
cufflinks 6.0583 0.0 19.2172    
cufflinks 13.7802 0.0 39.0054    
cufflinks 3.25469 0.0 11.1621   Low
cufflinks 3.406        
cufflinks 0.904       Low
cufflinks 7.749     High  
cufflinks 1.554        
cufflinks 0.862       Low
cufflinks 1.029        
cufflinks 10.178     High  
cufflinks 1.101        
cufflinks 10.022     High  
cufflinks 6.641        
cufflinks 12.557     High High
cufflinks 0.852       Low
cufflinks 12.897     High High
cufflinks 9.735     High  
cufflinks 0.966       Low
cufflinks 12.157     High High
cufflinks 0.889       Low

0 Strain